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Research Output 1970 2020

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2020

Osmotolerance as a determinant of microbial ecology: A study of phylogenetically diverse fungi

Araújo, C. A. S., Ferreira, P. C., Pupin, B., Dias, L. P., Avalos, J., Edwards, J., Hallsworth, J. E. & Rangel, D. E. N., 2020, In : Fungal Biology.

Research output: Contribution to journalArticle

osmotolerance
microbial ecology
Aspergillus
Ecology
Colletotrichum
2019

A Call for Systems Epidemiology to Tackle the Complexity of Schistosomiasis, Its Control, and Its Elimination

Krauth, S. J., Balen, J., Gobert, G. N. & Lamberton, P. H. L., 29 Jan 2019, In : Tropical medicine and infectious disease. 4, 1, 11 p., 21.

Research output: Contribution to journalArticle

Open Access
File
Schistosomiasis
Epidemiology
Research
Infectious Disease Transmission
Knowledge Bases

A cool comparison of black and white pepper grades

van Ruth, S. M., Silvis, I. C. J., Ramos, M. E., Luning, P. A., Jansen, M., Elliott, C. T. & Alewijn, M., Jun 2019, In : LWT. 106, p. 122-127 6 p.

Research output: Contribution to journalArticle

Open Access
File
Piper nigrum
pepper
black pepper
peppers
volatile organic compounds

Additive multiple predator effects can reduce mosquito populations

Cuthbert, R. N., Callaghan, A., Sentis, A., Dalal, A. & Dick, J. T. A., 02 Aug 2019, In : Ecological Entomology.

Research output: Contribution to journalArticle

mosquito
Culicidae
predator
predators
natural enemy
2 Citations (Scopus)

Advantages of social skills for contest resolution.

Camerlink, I., Turner, S., Farish, M. & Arnott, G., 09 May 2019, In : Royal Society Open Science.

Research output: Contribution to journalArticle

Open Access
File
Aptitude
Wounds and Injuries
Costs and Cost Analysis
Animal Welfare
Socialization

A global screen for assembly state changes of the mitotic proteome by SEC-SWATH-MS

Heusel, M., Frank, M., Koehler, M., Amon, S., Frommelt, F., Rosenberger, G., Bludau, I., Aulakh, S., Linder, M. I., Liu, Y., Collins, B. C., Matthias, G., Ulrike, K. & Aebersold, R., 09 May 2019, In : bioRxiv.

Research output: Contribution to journalArticle

Open Access
File
Proteome
Nuclear Pore
Proteins
Interphase
Mitosis

A high prevalence of biallelic RPE65 mutations in Costa Rican children with Leber congenital amaurosis and early-onset retinal dystrophy

Glen, W. B., Peterseim, M. M. W., Badilla, R., Znoyko, I., Bourg, A., Wilson, R., Hardiman, G., Wolff, D. & Martinez, J., 14 Mar 2019, In : Ophthalmic genetics. 40, 2, p. 110-117 8 p.

Research output: Contribution to journalArticle

Leber Congenital Amaurosis
Retinal Dystrophies
Mutation
Exome
Costa Rica

A holistic study to understand the detoxification of mycotoxins in maize and impact on its molecular integrity using cold atmospheric plasma treatment

Wielogorska, E., Ahmed, Y., Meneely, J., Graham, W. G., Elliott, C. T. & Gilmore, B. F., 29 Jul 2019, In : Food Chemistry. 301, 8 p., 125281.

Research output: Contribution to journalArticle

Plasma Gases
Detoxification
Atmospheric Pressure
Mycotoxins
atmospheric pressure
Glucagon-Like Peptide 1
Organic pollutants
Blood
Enteroendocrine Cells
Environmental Exposure
2 Citations (Scopus)

A Human Skin Model Recapitulates Systemic Sclerosis Dermal Fibrosis and Identifies COL22A1 as a TGFβ Early Response Gene that Mediates Fibroblast to Myofibroblast Transition

Watanabe, T., Baker Frost, D., Mlakar, L., Heywood, J., da Silveira, W. A., Hardiman, G. & Feghali-Bostwick, C., 22 Jan 2019, In : Genes. 10, 2

Research output: Contribution to journalArticle

Open Access
File
Myofibroblasts
Systemic Scleroderma
Fibrosis
Fibroblasts
Skin
7 Citations (Scopus)

Airborne microbial transport limitation to isolated Antarctic soil habitats

Archer, S. DJ., Lee, K. C., Caruso, T., Maki, T., Lee, C. K., Cary, S. C., Cowan, D. A., Maestre, F. T. & Pointing, S. B., 04 Mar 2019, In : Nature Microbiology. 8 p.

Research output: Contribution to journalArticle

Open Access
File
Ecosystem
Soil
Climate Change
Ice
Air
1 Citation (Scopus)

Ambient mass spectrometry based on REIMS for the rapid detection of adulteration of minced meats by the use of a range of additives

Kosek, V., Uttl, L., Jírů, M., Black, C., Chevallier, O., Tomaniová, M., Elliott, C. T. & Hajšlová, J., Oct 2019, In : Food Control. 104, p. 50-56 7 p.

Research output: Contribution to journalArticle

Open Access
File
minced meat
adulterated products
Meat
Mass Spectrometry
Meat Products

A mixture of persistent organic pollutants relevant for human exposure inhibits the transactivation activity of the aryl hydrocarbon receptor in vitro

Doan, Q. T., Berntsen, H. F., Verhaegen, S., Ropstad, E., Connolly, L., Igout, A., Muller, M. & Scippo, M-L., 28 Aug 2019, In : Environmental Pollution . 113098.

Research output: Contribution to journalArticle

Aryl Hydrocarbon Receptors
Organic pollutants
Transcriptional Activation
Hydrocarbons
Polychlorinated biphenyls
5 Citations (Scopus)

Anadromy, potamodromy and residency in brown trout Salmo trutta: the role of genes and the environment

Ferguson, A., Reed, T. E., Cross, T. F., McGinnity, P. & Prodohl, P. A., 10 May 2019, In : Journal of Fish Biology. 27 p.

Research output: Contribution to journalArticle

Open Access
File
anadromy
anadromous fish
Salmo trutta
rivers
gene

Analysis of viral and bacterial communities in groundwater associated with contaminated land

Costeira, R., Doherty, R., Allen, C. C. R., Larkin, M. J. & Kulakov, L. A., 15 Mar 2019, In : Science of the Total Environment. 656, p. 1413-1426 14 p.

Research output: Contribution to journalArticle

Open Access
File
contaminated land
Bacteriophages
Groundwater
plume
Bacteria

Antibacterial, anti-inflammatory and peroxidasemediated cyclooxygenase-1 inhibitory properties of Fusarium solani extract

Ngwoke, K., Tochukwu, N., Chinechem, E., Nwankwo, V., Obi-Okafor, U., Izundu, C., Okoye, F. B. C., Esimone, C., Proksch, P. & Situ, C., 2019, In : Pharmaceutical Biology. 57, 1, p. 310-317

Research output: Contribution to journalArticle

Open Access
File
Cyclooxygenase 1
Fusarium
Fungi
Anti-Inflammatory Agents
Soil
4 Citations (Scopus)

An untargeted chemometric evaluation of plasma and ozone processing effect on volatile compounds in orange juice

Alves Filho, E. G., Rodrigues, T. H. S., Fernandes, F. A. N., de Brito, E. S., Cullen, P. J., Frias, J. M., Bourke, P., Cavalcante, R. S., Almeida, F. D. L. & Rodrigues, S., 01 May 2019, In : Innovative Food Science and Emerging Technologies. 53, p. 63-69 7 p.

Research output: Contribution to journalArticle

chemometrics
Ozone
orange juice
ozone
volatile compounds
1 Citation (Scopus)

A Pilot Randomized Controlled Trial of a Digital Intervention Aimed at Improving Food Purchasing Behavior: The Front-of-Pack Food Labels Impact on Consumer Choice Study

Harrington, R. A., Scarborough, P., Hodgkins, C., Raats, M. M., Cowburn, G., Dean, M., Doherty, A., Foster, C., Juszczak, E., Mhurchu, C. N., Winstone, N., Shepherd, R., Timotijevic, L. & Rayner, M., 08 Apr 2019, In : Journal of Medical Internet Research. 21, 4, 16 p., e9910.

Research output: Contribution to journalArticle

Open Access
File
Randomized Controlled Trials
Food
Meals
Light
Public Health

Application of 1H-NMR Metabolomics for the Discovery of Blood Plasma Biomarkers of a Mediterranean Diet

Macias, S., Kirma, J., Yilmaz, A., Moore, S. E., McKinley, M. C., McKeown, P. P., Woodside, J. V., Graham, S. F. & Green, B. D., 27 Sep 2019, In : Metabolites. 9, 10, 14 p., 201.

Research output: Contribution to journalArticle

Open Access
File
Mediterranean Diet
Metabolomics
Biomarkers
Nutrition
Blood
1 Citation (Scopus)

Arabidopsis FLL2 promotes liquid-liquid phase separation of polyadenylation complexes

Fang, X., Wang, L., Ishikawa, R., Li, Y., Fiedler, M., Liu, F., Calder, G., Rowan, B., Weigel, D., Li, P. & Dean, C., 01 May 2019, In : Nature. 569, 7755, p. 265-269 5 p.

Research output: Contribution to journalArticle

Polyadenylation
Arabidopsis
RNA 3' End Processing
RNA
Arabidopsis Proteins

Are the claims to blame? A qualitative study to understand the effects of nutrition and health claims on perceptions and consumption of food

Benson, T., Lavelle, F., McCloat, A., Mooney, E., Bucher, T., Egan, B. & Dean, M., 02 Sep 2019, In : Nutrients. 11, 9, 14 p., 2058.

Research output: Contribution to journalArticle

Open Access
File
health claims
food consumption
nutrition
Food
Health

Assessing factors driving the distribution and characteristics of shoreline macroplastics in a subtropical reservoir

Dalu, T., Malesa, B. & Cuthbert, R., 19 Aug 2019, In : Science of the Total Environment. 696, 8 p., 133992.

Research output: Contribution to journalArticle

Debris
shoreline
plastic
freshwater ecosystem
Plastics

Assessing lake ecological status across a trophic gradient through environmental and biological variables

Macintosh, K. A., Cromie, H., Forasacco, E., Gallagher, K., Kelly, F. L., McElarney, Y., O'Kane, E., Paul, A., Rippey, B., Rosell, R., Vaughan, L., Ward, C. & Griffiths, D., 10 Nov 2019, In : Science of the Total Environment. 690, p. 831-840

Research output: Contribution to journalArticle

Lakes
cyprinid
Fish
lake
Phosphorus

Associations between maternal inflammation during pregnancy and infant birth outcomes in the Seychelles Child Development Study

Yeates, A. J., McSorley, E. M., Mulhern, M. S., Spence, T., Crowe, W., Grzesik, K., Thurston, S. W., Watson, G. E., Myers, G. J., Davidson, P. W., Shamlaye, C. F., van Wijngaarden, E. & Strain, J. J., 23 Oct 2019, In : Journal of Reproductive Immunology. 16 p.

Research output: Contribution to journalArticle

Seychelles
Vascular Endothelial Growth Factor D
Child Development
Mothers
Parturition

A systematic review of consumer perceptions of food and authenticity: A European perspective.

Kendall, H., Clark, B., Rhymer, C., Kuznesof, S., Hajšlová, J., Tomaniova, M., Brereton, P. & Frewer, L., 21 Oct 2019, In : Trends in Food Science and Technology. 12 p., TIFS_2019_556_R1.

Research output: Contribution to journalArticle

Open Access
fraud
consumer attitudes
Fraud
systematic review
foods
1 Citation (Scopus)

Barriers and facilitators to shellfish cultivation

Fox, M., Service, M., Moore, H., Dean, M. & Campbell, K., 28 Jan 2019, In : Reviews in Aquaculture.

Research output: Contribution to journalArticle

Northern Ireland
shellfish
aquaculture
industry
environmental economics

Beds Are Burning: eradication and control of invasive Asian clam, Corbicula fluminea, with rapid open-flame burn treatments

Coughlan, N., Cuthbert, R., Potts, S., Cunningham, E., Crane, K., Lucy, F. E., Davis, E. & Dick, J., 12 Aug 2019, In : Management of Biological Invasions.

Research output: Contribution to journalArticle

Open Access
File
Corbicula fluminea
clams
substrate
mortality
freshwater environment
3 Citations (Scopus)

Better biosecurity: spread-prevention of the invasive Asian clam, Corbicula fluminea (Müller, 1774)

Coughlan, N., Cuthbert, R., Dickey, J., Crane, K., Caffrey, J., Lucy, F. E., Davis, E. & Dick, J., 21 Jan 2019, In : Management of Biological Invasions.

Research output: Contribution to journalArticle

Open Access
File
Corbicula fluminea
biosecurity
clams
disinfectants
invasive species

Biodiversidata: An Open-Access Biodiversity Database for Uruguay

Grattarola, F., Botto, G., da Rosa, I., Gobel, N., González, E. M., González, J., Hernández, D., Laufer, G., Maneyro, R., Martínez-Lanfranco, J. A., Naya, D. E., Rodales, A. L., Ziegler, L. & Pincheira-Donoso, D., 2019, In : Biodiversity Data Journal. 7, p. e36226 18 p.

Research output: Contribution to journalArticle

Open Access
File
biodiversity
ecoregion
distribution

BioSAxS measurements reveal that two antimicrobial peptides induce similar molecular changes in Gram-negative and Gram-positive bacteria

Von Gundlach, A., Ashby, M. P., Gani, J., Lopez-Perez, P. M., Cookson, A. R., Huws, S. A., Rumancev, C., Garamus, V. M., Mikut, R., Rosenhahn, A. & Hilpert, K., 26 Sep 2019, In : Frontiers in Pharmacology. 10, 10 p., 1127.

Research output: Contribution to journalArticle

Open Access
File
Gram-Positive Bacteria
Methicillin-Resistant Staphylococcus aureus
Adenosine Monophosphate
Gram-Negative Bacteria
Peptides
1 Citation (Scopus)

Biotic interactions are an unexpected yet critical control on the complexity of an abiotically driven polar ecosystem

Lee, C. K., Laughlin, D. C., Bottos, E. M., Caruso, T., Joy, K., Barrett, J. E., Brabyn, L., Nielsen, U. N., Adams, B. J., Wall, D. H., Hopkins, D. W., Pointing, S. B., McDonald, I. R., Cowan, D. A., Banks, J. C., Stichbury, G. A., Jones, I., Zawar-Reza, P., Katurji, M., Hogg, I. D. & 4 othersSparrow, A. D., Storey, B. C., Allan Green, T. G. & Cary, S. C., 15 Feb 2019, In : Communications Biology. 2, 10 p., 62.

Research output: Contribution to journalArticle

Open Access
File
ecosystem
valley
biotic factor
functional group
community structure
2 Citations (Scopus)

Blueberries improve biomarkers of cardiometabolic function in participants with metabolic syndrome-results from a 6-month, double-blind, randomized controlled trial

Curtis, P. J., Van Der Velpen, V., Berends, L., Jennings, A., Feelisch, M., Umpleby, A. M., Evans, M., Fernandez, B. O., Meiss, M. S., Minnion, M., Potter, J., Minihane, A. M., Kay, C. D., Rimm, E. B. & Cassidy, A., 01 Jun 2019, In : American Journal of Clinical Nutrition. 109, 6, p. 1535-1545 11 p.

Research output: Contribution to journalArticle

Open Access
File
Blueberry Plants
Randomized Controlled Trials
Biomarkers
Insulin Resistance
Nitric Oxide

Bottom-Up Forces Drive Increases in the Abundance of Large Daphnids in Four Small Lakes Stocked with Rainbow Trout (Oncorhynchus mykiss), Interior British Columbia, Canada

Mushet, G. R., Laird, K. R., Leavitt, P., Maricle, S., Klassen, A. & Cumming, B. F., 23 Sep 2019, In : Ecosystems.

Research output: Contribution to journalArticle

Open Access
File
Fish
British Columbia
rainbow
Lakes
Oncorhynchus mykiss

Bovine tuberculosis breakdown duration in cattle herds: an investigation of herd, host, pathogen and wildlife risk factors

Milne, G., Allen, A. R., Graham, J., Lahuerta-Marin, A., McCormick, C., Presho, E. L., Reid, N., Skuce, R. & Byrne, A., 11 Sep 2019, In : PeerJ.

Research output: Contribution to journalArticle

File
Bovine Tuberculosis
Mustelidae
bovine tuberculosis
Pathogens
wildlife

Catalytic and biophysical investigation of rhodium hydroformylase

Imam, H. T., Jarvis, A., Celorrio, V., Baig, I., Allen, C., Marr, A. & Kamer, P., 16 Oct 2019, In : CATALYSIS SCIENCE & TECHNOLOGY.

Research output: Contribution to journalArticle

Rhodium
Hydroformylation
Methionine
Catalysts
Nuclear magnetic resonance spectroscopy

Cerebrospinal Fluid Spermidine, Glutamine and Putrescine Predict Postoperative Delirium Following Elective Orthopaedic Surgery

Pan, X., Cunningham, E. L., Passmore, A. P., McGuinness, B., McAuley, D. F., Beverland, D., O'Brien, S., Mawhinney, T., Schott, J. M., Zetterberg, H. & Green, B. D., 12 Mar 2019, In : Scientific Reports. 9, 1, 9 p., 4191.

Research output: Contribution to journalArticle

Open Access
File
Putrescine
Spermidine
Delirium
Glutamine
Orthopedics
1 Citation (Scopus)
Open Access
File
Transaminases
Salts
Enzymes
Haloferax volcanii
Biocatalysis
1 Citation (Scopus)

Characterization of a novel folic acid-fortified ready-to-eat parboiled rice

Wahengbam, E. D., Green, B. D. & Hazarika, M. K., 10 May 2019, In : Cereal Chemistry. 96, 3, p. 439-446 8 p.

Research output: Contribution to journalArticle

Folic Acid
folic acid
rice
parboiling
Cooking
7 Citations (Scopus)

Chinese consumer's attitudes, perceptions and behavioural responses towards food fraud

Kendall, H., Kuznesof, S., Dean, M., Chan, M. Y., Clark, B., Home, R., Stolz, H., Zhong, Q., Liu, C., Brereton, P. & Frewer, L., 01 Jan 2019, In : Food Control. 95, p. 339-351 13 p.

Research output: Contribution to journalArticle

Open Access
File
fraud
Fraud
consumer attitudes
Food
product authenticity
2 Citations (Scopus)

cis‐Dihydroxylation of Tricyclic Arenes and Heteroarenes Catalyzed by Toluene Dioxygenase: A Molecular Docking Study and Experimental Validation

Boyd, D., Sharma, N. D., Brannigan, I., McGivern, C., Nockemann, P., Stevenson, P., McRoberts, C., Hoering, P. & Allen, C. C. R., 18 Mar 2019, In : Advanced Synthesis & Catalysis.

Research output: Contribution to journalArticle

Metabolites
Phenol
Derivatives
Dioxygenases
X ray crystallography

Combined impacts of warming and salinisation on trophic interactions and mortality of a specialist ephemeral wetland predator

Cuthbert, R. N., Weyl, O. L. F., Wasserman, R. J., Dick, J. T. A., Froneman, P. W., Callaghan, A. & Dalu, T., 18 Jun 2019, In : Freshwater Biology. 9 p.

Research output: Contribution to journalArticle

Open Access
File
trophic interaction
salinization
wetlands
warming
wetland

Combining biomarker and food intake data: calibration equations for citrus intake

D'Angelo, S., Gormley, I., McNulty, B., Nugent, A., Walton, J., Flynn, A. & Brennan, L., 20 Aug 2019, In : American Journal of Clinical Nutrition.

Research output: Contribution to journalArticle

Citrus
Calibration
Eating
Biomarkers
Linear Models

Comparative analysis of mRNA and protein degradation in prostate tissues indicates high stability of proteins

Shao, W., Guo, T., Toussaint, N. C., Xue, P., Wagner, U., Li, L., Charmpi, K., Zhu, Y., Wu, J., Buljan, M., Sun, R., Rutishauser, D., Hermanns, T., Fankhauser, C. D., Poyet, C., Ljubicic, J., Rupp, N., Rüschoff, J. H., Zhong, Q., Beyer, A. & 6 othersJi, J., Collins, B. C., Liu, Y., Rätsch, G., Wild, P. J. & Aebersold, R., 07 Jun 2019, In : Nature Communications. 10, 1

Research output: Contribution to journalArticle

Open Access
File
Protein Stability
RNA Stability
Proteolysis
Prostate
Tissue
Open Access
File
Zearalenone
Aflatoxin B1
Mycotoxins
Animals
T-2 Toxin
6 Citations (Scopus)

Comparative metagenomic and metatranscriptomic analyses reveal the breed effect on the rumen microbiome and its associations with feed efficiency in beef cattle

Li, F., Hitch, T. C. A., Chen, Y., Creevey, C. J. & Guan, L. L., 14 Jan 2019, In : Microbiome. 7, 21 p., 6.

Research output: Contribution to journalArticle

Open Access
File
Metagenomics
Microbiota
Rumen
Messenger RNA
RNA
5 Citations (Scopus)

Complex‐centric proteome profiling by SEC ‐ SWATH ‐ MS

Heusel, M., Bludau, I., Rosenberger, G., Hafen, R., Frank, M., Banaei‐Esfahani, A., Drogen, A., Collins, B. C., Gstaiger, M. & Aebersold, R., 01 Jan 2019, In : Molecular systems biology.

Research output: Contribution to journalArticle

Open Access
File
Size exclusion chromatography
Proteome
proteome
Profiling
Chromatography
3 Citations (Scopus)

Context-aware Mouse Behaviour Recognition using Hidden Markov Models

Jiang, Z., Crookes, D., Green, B. D., Zhao, Y., Ma, H., Li, L., Zhang, S., Tao, D. & Zhou, H., Mar 2019, In : IEEE Trans. on Image Processing. 28, 3, p. 1133 - 1148 16 p.

Research output: Contribution to journalArticle

Open Access
File
Hidden Markov models
Processing
Psychiatry
Deep learning

Contribution of Berry Polyphenols to the Human Metabolome

Chandra, P., Rathore, A. S., Kay, K. L., Everhart, J. L., Curtis, P., Burton-Freeman, B., Cassidy, A. & Kay, C. D., 20 Nov 2019, In : Molecules.

Research output: Contribution to journalArticle

Open Access
File
Metabolome
Phytochemicals
Polyphenols
Metabolites
hippuric acid
1 Citation (Scopus)

Critical assessment of recent trends related to screening and confirmatory analytical methods for selected food contaminants and allergens

Tsagkaris, A. S., Nelis, J. L. D., Ross, G. M. S., Jafari, S., Guercetti, J., Kopper, K., Zhao, Y., Rafferty, K., Salvador, J. P., Migliorelli, D., Salentijn, G. IJ., Campbell, K., Marco, M. P., Elliot, C. T., Nielen, M. W. F., Pulkrabova, J. & Hajslova, J., 17 Oct 2019, In : TrAC - Trends in Analytical Chemistry. 115688.

Research output: Contribution to journalArticle

Open Access
File
Allergens
Screening
Impurities
Food safety
Chemical compounds
1 Citation (Scopus)

Current trends in rapid tests for mycotoxins

Nolan, P., Auer, S., Spehar, A., Elliott, C. T. & Campbell, K., 2019, In : Food Additives and Contaminants: Part A. 36, 5, p. 800-814 15 p.

Research output: Contribution to journalArticle

Mycotoxins
mycotoxins
Assays
assays
immunoassays