Projects per year
Personal profile
Research Interests
We are a proteomics focused research group. Our interests are broadly in 3 areas:
(i) Method development and applications in quantitative proteomics with a focus of data independent acquisition (DIA/SWATH) mass spectrometry
(ii) The analysis of protein interaction networks and protein complexes using targeted (e.g. affinity purification) and global (e.g. SEC) methods coupled to quantitative mass spectrometry
(iii) Host-pathogen biology
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
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Collaborations and top research areas from the last five years
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Projects
- 7 Active
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R8544BSC: Can circulating inflammatory mediators predict active tuberculosis in HIV+ patients?
22/02/2023 → …
Project: Research
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R1554CEM: Dissecting the role of infection-driven protein mono-glycosylation in Legionella-host interaction
Schroeder, G. N., Collins, B. & Wagner, G.
31/08/2021 → …
Project: Research
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R1544CEM: Investigating the thermal biology of inflammasomes – is NLRP3 a thermosensor?
Coll, R., Collins, B. & Margariti, A.
25/06/2021 → …
Project: Research
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A gas phase fractionation acquisition scheme integrating ion mobility for rapid diaPASEF library generation
Penny, J., Arefian, M., Schroeder, G. N., Bengoechea, J. A. & Collins, B. C., 10 Mar 2023, (Early online date) In: Proteomics. 8 p., 2200038.Research output: Contribution to journal › Article › peer-review
Open AccessFile22 Downloads (Pure) -
Rapid profiling of protein complex reorganization in perturbed systems
Bludau, I., Nicod, C., Martelli, C., Xue, P., Heusel, M., Fossati, A., Uliana, F., Frommelt, F., Aebersold, R. & Collins, B. C., 05 May 2023, In: Journal of Proteome Research. 22, 5, p. 1520-1536 17 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile30 Downloads (Pure) -
Diagnostics and correction of batch effects in large‐scale proteomic studies: a tutorial
Čuklina, J., Lee, C. H., Williams, E. G., Sajic, T., Collins, B. C., Martínez, M. R., Sharma, V. S., Wendt, F., Goetze, S., Keele, G. R., Wollscheid, B., Aebersold, R. & Pedrioli, P. G. A., 25 Aug 2021, In: Molecular systems biology. 17, 8, 17 p., e10240.Research output: Contribution to journal › Article › peer-review
Open AccessFile390 Downloads (Pure) -
Expression Dysregulation as a Mediator of Fitness Costs in Antibiotic Resistance
Trauner, A., Banaei-Esfahani, A., Gygli, S. M., Warmer, P., Feldmann, J., Zampieri, M., Borrell, S., Collins, B. C., Beisel, C., Aebersold, R. & Gagneux, S., Sep 2021, In: Antimicrobial Agents and Chemotherapy. 65, 9, 18 p., e00504-21.Research output: Contribution to journal › Article › peer-review
Open AccessFile28 Downloads (Pure) -
From coarse to fine: the absolute Escherichia coli proteome under diverse growth conditions
Mori, M., Zhang, Z., Banaei‐Esfahani, A., Lalanne, JB., Okano, H., Collins, B. C., Schmidt, A., Schubert, O. T., Lee, DS., Li, GW., Aebersold, R., Hwa, T. & Ludwig, C., 01 May 2021, In: Molecular systems biology. 17, 5, e9536.Research output: Contribution to journal › Article › peer-review
Open AccessFile2 Citations (Scopus)76 Downloads (Pure)