Projects per year
Personal profile
Research Focus
The intestinal microbiome consists of trillions of beneficial bacteria, which live in synergy with their human hosts. Such microorganisms enormously impact our health in ways that had been completely unanticipated. One aspect that is poorly understood is how bacteria can successfully colonize this very specialized intestinal environment in the first place, a process that starts shortly after birth.
For a detailed overview click: www.cisneros-lab.org
Improving patient outcomes:
Our team is interested in studying how bacteria from the intestinal microbiota, which under normal circumstances live in harmony with their human hosts, occasionally express phenotypes that cause disease. We use state of the art molecular biology, sequencing and genetic engineering to answer these questions.
Ultimately, our goal is to achieve an integrated understanding of health by studying the nature of the symbiotic coexistence of humans and microbes. Using experimental medicine approaches, we aim at harnessing the influence that the microbiome has on human physiology to design novel patient treatments for chronic inflammatory diseases and colorectal cancer.
Cisneros lab | microbiome | CRISPR-Cas | bacterial secretion |
Social media: Twitter @cisneros_lab
Other
To see all my publications see my Google-Scholar profile
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
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SDG 2 Zero Hunger
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SDG 3 Good Health and Well-being
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Collaborations and top research areas from the last five years
Projects
- 1 Active
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R2304PMY: NICOLA-biome: The NICOLA gut microbiome databank and investigation of interrelationships between the microbiome and medication response in older people
Kelly, S. (PI), Cisneros, D. A. (CoI), Cunningham, E. (CoI), Ingram, B. (CoI), McGuinness, B. (CoI) & McKay, G. (CoI)
22/01/2025 → …
Project: Research
Research output
- 29 Article
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CRISPR-Cas-guided mutagenesis of chromosome and virulence plasmid in Shigella flexneri by cytosine base editing
Sharma, A., Omer Aden, R., Puhar, A. & Cisneros, D. A., 01 Feb 2023, In: mSystems. 8, 1, 15 p., e0104522.Research output: Contribution to journal › Article › peer-review
Open AccessFile3 Link opens in a new tab Citations (Scopus)36 Downloads (Pure) -
Polar mutagenesis of polycistronic bacterial transcriptional units using Cas12a
Graffeuil, A., Guerrero-Castro, J., Assefa, A., Uhlin, B. E. & Cisneros, D. A., 13 Jul 2022, In: Microbial Cell Factories. 21, 15 p., 139.Research output: Contribution to journal › Article › peer-review
Open AccessFile4 Link opens in a new tab Citations (Scopus)93 Downloads (Pure) -
Infection-induced membrane ruffling initiates danger and immune signaling via the mechanosensor PIEZO1
Tadala, L., Langenbach, D., Dannborg, M., Cervantes-Rivera, R., Sharma, A., Vieth, K., Rieckmann, L. M., Wanders, A., Cisneros, D. A. & Puhar, A., 09 Aug 2022, In: Cell Reports. 40, 6, 28 p., 111173.Research output: Contribution to journal › Article › peer-review
Open AccessFile21 Link opens in a new tab Citations (Scopus)93 Downloads (Pure) -
Topologically associating domains and chromatin loops depend on cohesin and are regulated by CTCF, WAPL, and PDS5 proteins
Wutz, G., Varnai, C., Nagasaka, K., Cisneros, D. A., Stocsits, R. R., Tang, W., Schoenfelder, S., Jessberger, G., Muhar, M., Hossain, M. J., Walther, N., Koch, B., Kueblbeck, M., Ellenberg, J., Zuber, J., Fraser, P. & Peters, J.-M., 15 Dec 2017, In: The EMBO Journal. 36, 24, p. 3573-3599 27 p.Research output: Contribution to journal › Article › peer-review
Open Access598 Link opens in a new tab Citations (Scopus) -
Minor pseudopilin self-assembly primes type II secretion pseudopilus elongation
Cisneros, D. A., Bond, P. J., Pugsley, A. P., Campos, M. & Francetic, O., 15 Feb 2012, In: The EMBO Journal. 31, 4, p. 1041-1053Research output: Contribution to journal › Article › peer-review
82 Link opens in a new tab Citations (Scopus)
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UK cellular microbiology Network meeting 2026 - Organisation
Schroeder, G. N. (Organiser), Puhar, A. (Organiser), Cisneros, D. A. (Organiser), Odendall, C. (Organiser) & Valvano, M. A. (Organiser)
01 Nov 2025 → 23 Jun 2026Activity: Participating in or organising an event types › Participation in conference
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Journées Sécrétion 2025 (Bacterial secretion symposium)
Cisneros, D. A. (Presenter)
02 Oct 2025 → 03 Oct 2025Activity: Participating in or organising an event types › Participation in conference
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Hierarchical structures in a Bacteroides T6SS reduce the complexity of their assembly through cooperativ
Cisneros, D. A. (Speaker)
Oct 2022Activity: Talk or presentation types › Oral presentation
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Life-science program, inspirational talk: "The history of CRISPR: a roadmap for scientific discovery"
Cisneros, D. A. (Invited speaker)
Oct 2022Activity: Talk or presentation types › Invited talk
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"Lucia night" inspirational talks 2020 - Årets Nobelpris i kemi: "Cas9, history and function"
Cisneros, D. A. (Advisor)
Dec 2021Activity: Talk or presentation types › Invited talk