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Accepting PhD Students

PhD projects

Open to PhD applications in the field of respiratory microbiology and molecular biology , antimicrobial discovery and repurposing.

19992019

Research output per year

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Research Output

2019
Open Access
File
4 Citations (Scopus)
15 Downloads (Pure)

Does spa type play a role in establishment of chronic MRSA infection?

Carson, G. & Gilpin, D., Jun 2019.

Research output: Contribution to conferencePoster

Open Access
File
47 Downloads (Pure)

Influence of azithromycin and allograft rejection on the post–lung transplant microbiota

Spence, C. D., Vanaudenaerde, B., Einarsson, G. G., Mcdonough, J., Lee, A. J., Johnston, E., Verleden, G. M., Elborn, J. S., Dupont, L. J., Van Herck, A., Gilpin, D. F., Vos, R., Tunney, M. M. & Verleden, S. E., 21 Nov 2019, In : Journal of Heart and Lung Transplantation.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Susceptibility of Pseudomonas aeruginosa recovered from cystic fibrosis patients to murepavadin and thirteen comparator antibiotics

Ekkelenkamp, M. B., Cantón, R., Díez-Aguilar, M., Tunney, M. M., Gilpin, D. F., Bernardini, F., Dale, G. E., Elborn, J. S., Bayjanov, J. R. & Fluit, A., 25 Nov 2019, In : Antimicrobial Agents and Chemotherapy.

Research output: Contribution to journalArticle

Open Access
File

WS19-3 Microbiota profiling during 1-year of clinical stability in people with cystic fibrosis - CFMATTERS Consortium

Einarsson, G., Flanagan, E., Lee, A., McGettigan, C., Smith, C., Gilpin, D., Elborn, J., Plant, B. J., Tunney, M. & on behalf of the CFMATTERS consortium, 06 Jun 2019, Journal of Cysric Fibrosis. Supplement 1 ed. European Cystic Fibrosis Society, Vol. Volume 18. p. S35 1 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access
2018

A cross-sectional analysis of cough swabs from non-expectorating CF patients and healthy control participants

Einarsson, G., Sherrard, L., Johnston, E., O'Neill, K., McIlreavey, L., McGrath, S., Gilpin, D., Murray, M. A., Lavelle, G. M., McElvaney, N. G., Boucher, R. C., Muhlebach, M. S., Elborn, J. & Tunney, M., 03 Jun 2018, In : Journal of Cystic Fibrosis. 17, Supplement 3, p. S74-S75 1 p., P055.

Research output: Contribution to journalMeeting abstract

Open Access
File
74 Downloads (Pure)

Anaerobic bacteria cultured from CF airways correlate to milder disease-a multisite study

Muhlebach, M. S., Hatch, J. E., Einarsson, G. G., McGrath, S. J., Gilipin, D. F., Lavelle, G., Mirkovic, B., Murray, M. A., McNally, P., Gotman, N., Davis Thomas, S., Wolfgang, M. C., Gilligan, P. H., McElvaney, N. G., Elborn, J. S., Boucher, R. C. & Tunney, M. M., 2018, In : European Respiratory Journal. 52, 1

Research output: Contribution to journalArticle

Open Access
File
12 Citations (Scopus)
39 Downloads (Pure)

Criteria required for an acceptable point-of-care test for UTI detection: Obtaining consensus using the Delphi technique

Weir, N-J. M., Pattison, S. H., Kearney, P., Stafford, B., Gormley, G. J., Crockard, M. A., Gilpin, D. F., Tunney, M. M. & Hughes, C. M., 07 Jun 2018, In : PLoS ONE. 13, 6, 13 p., e0198595.

Research output: Contribution to journalArticle

Open Access
File
174 Downloads (Pure)

P053 Use of extended-quantitative culture does not predict an imminent pulmonary exacerbation (PEx).

Sherrard, L., Einarsson, G., Johnston, E., O'Neill, K., McIlreavey, L., McGrath, S., Gilpin, D., Murray, M. A., Lavelle, G. M., McElvaney, N., Boucher, R. C., Muhlebach, M. S., Elborn, J. & Tunney, M., Jun 2018, In : Journal of Cystic Fibrosis.

Research output: Contribution to journalMeeting abstract

Pathogen eradication” and “Emerging pathogens”: Difficult definitions in cystic fibrosis

Gilligan, P. H., Downey, D. G., Elborn, J. S., Flume, P. A., Funk, S., Gilpin, D., Kidd, T. J., McCaughan, J., Millar, B. C., Murphy, P. G., Rendall, J. C., Tunney, M. M. & Moore, J. E., 06 Jun 2018, In : Journal of Clinical Microbiology. p. 1-23

Research output: Contribution to journalArticle

Open Access
File
2 Citations (Scopus)
57 Downloads (Pure)
2017
Open Access
File
7 Citations (Scopus)
165 Downloads (Pure)

Evidence of persistence of Prevotella spp. in the cystic fibrosis lung

Gilpin, D. F., Nixon, K. A., Bull, M., McGrath, S. J., Sherrard, L., Rolain, J. M., Mahenthiralingam, E., Elborn, J. S. & Tunney, M. M., 13 Jun 2017, In : Journal of Medical Microbiology. 66, p. 825-832

Research output: Contribution to journalArticle

4 Citations (Scopus)
2016

Cigarettes, e-cigarettes and Pseudomonas aeruginosa: Interactions in the CF lung?

McGown, K-A., Bengoechea, J., Dumigan, A., Elborn, J. S., Tunney, M. M. & Gilpin, D., Jun 2016, In : Journal of Cystic Fibrosis. 15, Supplement 1, p. S65 1 p.

Research output: Contribution to journalMeeting abstract

25 Citations (Scopus)

Susceptibility of Staphylococcus aureus isolates from patients with and without cystic fibrosis to ceftobiprole

Gilpin, D., Carson, G., Lee, A., McGrath, S., Elborn, J. S. & Tunney, M. M., Jun 2016, In : Journal of Cystic Fibrosis. 15, S1, p. S83-S84 2 p., 129.

Research output: Contribution to journalMeeting abstract

2015

72 Potential for airborne bacterial contamination in an outpatient respiratory clinic

McElderry, J., O'Neill, K., Tunney, M. M., Downey, D. G., Rendall, J. C., Moore, J. E., Elborn, J. S. & Gilpin, D. F., Jun 2015, In : Journal of Cystic Fibrosis. 14, Supplement 1, p. S75 1 p.

Research output: Contribution to journalMeeting abstract

Open Access

93 Production of virulence factors by Prevotella isolates belonging to the cystic fibrosis (CF) respiratory microbiota

Sherrard, L. J., Matier, T. B., Nixon, K. A., McGrath, S., McIlreavey, L., Hatch, J., Wolfgang, M. C., Muhlebach, M. S., Gilpin, D. F., Elborn, J. S. & Tunney, M. M., Jun 2015, In : Journal of Cystic Fibrosis. 14, Supplement 1, p. S81 1 p.

Research output: Contribution to journalMeeting abstract

Open Access

Airborne Bacterial Contamination within an Outpatient Respiratory Clinic

J, M., O'Neill, K., Tunney, M., Downey, D., Rendall, J., Moore, J., Elborn, J. & Gilpin, D., 2015, p. S539-S540.

Research output: Contribution to conferenceAbstract

ePS06.8 Cigarette smoke-induced changes in phenotype and virulence in Pseudomonas aeruginosa

McGown, K-A., McGrath, S., Tunney, M. M., Elborn, J. S. & Gilpin, D. F., 05 Jun 2015, In : Journal of Cystic Fibrosis. 14, Supplement 1, p. S54

Research output: Contribution to journalMeeting abstract

WS02.7 Initial and chronic MRSA infection in cystic fibrosis

Gilpin, D. F., Murdock, S., Hoffman, L. R., Vallières, E., McGrath, S., Tunney, M. M., Elborn, J. S. & Muhlebach, M. S., 2015, In : Journal of Cystic Fibrosis. 14, Supplement 1, p. S4 1 p.

Research output: Contribution to journalMeeting abstract

2014

70: Expression of RND-type efflux pumps as a mechanism of antibiotic resistance in clinical Prevotella isolates

Sherrard, L., Schaible, B., Gilpin, DF., Elborn, JS. & Tunney, M., Jun 2014, In : Journal of Cystic Fibrosis. 13, Supplement 2, p. S64

Research output: Contribution to journalMeeting abstract

71: Extended-spectrum β-lactamase (ESβL) production: a mechanism of resistance to ceftazidime in Prevotella species isolated from patients with CF

Sherrard, L., Matier, T., Gilpin, DF., Muhlebach, M., Elborn, JS., Schneiders, T. & Tunney, M., Jun 2014, In : Journal of Cystic Fibrosis. 13, Supplement 2, p. S64

Research output: Contribution to journalMeeting abstract

BIIL 284 reduces neutrophil numbers but increases P. aeruginosa bacteremia and inflammation in mouse lungs

Döring, G., Bragonzi, A., Paroni, M., Aktürk, F-F., Cigana, C., Schmidt, A., Gilpin, D., Heyder, S., Born, T., Smaczny, C., Kohlhäufl, M., Wagner, T. O. F., Loebinger, M. R., Bilton, D., Tunney, M. M., Elborn, J. S., Pier, G. B., Konstan, M. W. & Ulrich, M., Mar 2014, In : Journal of Cystic Fibrosis. 13, 2, p. 156-63 8 p.

Research output: Contribution to journalArticle

32 Citations (Scopus)

Dual functional ionic liquids as antimicrobials and plasticisers for medical grade PVCs

Choi, S. Y., Rodriguez, H., Gunaratne, H. Q. N., Puga, A. V., Gilpin, D., McGrath, S., Vyle, J. S., Tunney, M. M., Rogers, R. D. & McNally, T., 2014, In : RSC Advances. 4, 17, p. 8567-8581 15 p.

Research output: Contribution to journalArticle

22 Citations (Scopus)

Mechanisms of reduced susceptibility and genotypic prediction of antibiotic resistance in Prevotella isolated from cystic fibrosis (CF) and non-CF patients

Sherrard, L. J., Schaible, B., Graham, K. A., McGrath, S. J., McIlreavey, L., Hatch, J., Wolfgang, M. C., Muhlebach, M. S., Gilpin, D. F., Schneiders, T., Elborn, J. S. & Tunney, M. M., Oct 2014, In : Journal of Antimicrobial Chemotherapy. 69, 10, p. 2690-8 9 p.

Research output: Contribution to journalArticle

14 Citations (Scopus)

S22 The Effect Of Cigarette Smoke On Important Pathogens In Copd Lung Infection

McGown, K., Tunney, MM., McGrath, SJ., Elborn, JS. & Gilpin, DF., Dec 2014, In : Thorax. 69, Supplement 2, p. A14 1 p.

Research output: Contribution to journalMeeting abstract

32 Citations (Scopus)

The effect of cigarette smoke on key pathogens in COPD lung infection

McGown, K-A., McGrath, S., Tunney, M., Elborn, S. & Gilpin, D., 01 Sep 2014, In : European Respiratory Journal. 44, Supplement 58, p. P4942

Research output: Contribution to journalMeeting abstract

WS16. 6 MALDI-TOF as an alternative method for the identification and typing of Prevotella species from CF patients

McIlreavey, L., Graham, K., McLean, D., McGrath, S. J., Bull, M., Mahenthiralingam, E., Elborn, J. S., Tunney, M., Rolain, J-M. & Gilpin, D. F., Jun 2014, In : Journal of Cystic Fibrosis. 13, p. S34

Research output: Contribution to journalMeeting abstract

WS2. 9 Inflammatory potential and antimicrobial susceptibility of bacteria in the cultivatable CF lung microbiome

Hatch, J., Kim, JD., McGrath, SJ., McIlreavey, L., Gilpin, DF., Lavelle, GM., Murray, M., Boucher, RC., Elborn, JS., McElvaney, NG., Muhlebach, M., Tunney, M., Wolfgang, M. C. & Randell, S. H., Jun 2014, In : Journal of Cystic Fibrosis. 13, Supplement 2, p. S5

Research output: Contribution to journalMeeting abstract

152 Prevotella spp. isolated from patients with cystic fibrosis: Transient or persistent colonisers? Journal of Cystic Fibrosis

Gilpin, D. F., Graham, K. A., Sherrard, L., McGrath, S., McIlreavey, L., Johnston, E., Bull, M., Mahenthiralingam, E., Elborn, J. S. & Tunney, M., 2013, In : Journal of Cystic Fibrosis. 12, p. S87

Research output: Contribution to journalMeeting abstract

79 Microarray analysis of the effect of fosfomycin and tobramycin against Pseudomonas aeruginosa from CF patients: Journal of Cystic Fibrosis

McCaughey, G., Gilpin, D. F., Schneiders, T., Hoffman, L., McKevitt, M., Elborn, J. S. & Tunney, M., 2013, In : Journal of Cystic Fibrosis. 12, p. S68

Research output: Contribution to journalMeeting abstract

8 Citations (Scopus)

84 Azithromycin resistance in Prevotella species isolated from CF patients: Journal of Cystic Fibrosis

Sherrard, L., Graham, K. A., McGrath, S., McIlreavey, L., Hatch, J., Muhlebach, M., Gilpin, D. F., Elborn, J. S., Schneiders, T. & Tunney, M., 2013, In : Journal of Cystic Fibrosis. 12, p. S70

Research output: Contribution to journalMeeting abstract

Antibiotic resistance in Prevotella species isolated from patients with cystic fibrosis

Sherrard, L. J., Graham, K. A., McGrath, S. J., McIlreavey, L., Hatch, J., Muhlebach, M. S., Wolfgang, M. C., Gilpin, D. F., Elborn, J. S., Schneiders, T. & Tunney, M. M., Oct 2013, In : Journal of Antimicrobial Chemotherapy. 68, 10, p. 2369-2374

Research output: Contribution to journalArticle

21 Citations (Scopus)

Extended-Spectrum β-Lactamase production by Prevotella Species isolated from patients with Cystic Fibrosis: Pediatric Pulmonology

Sherrard, L., Graham, K., Matier, T., Muhlebach, M. S., Gilpin, D., Elborn, J. S., Schneiders, T. & Tunney, M., Nov 2013, In : Pediatric Pulmonology. 48, S36, p. 327 1 p.

Research output: Contribution to journalMeeting abstract

Open Access
File
13 Citations (Scopus)
146 Downloads (Pure)

Investigation of RND Efflux Pumps in Clinical Prevotella Species isolated from CF Patients: Pediatric Pulmonology

Schaible, B., Sherrard, L., Gilpin, D., Elborn, J. S., Muhlebach, M. S. & Tunney, M., Oct 2013, In : Pediatric Pulmonology. 48, S36, p. 307

Research output: Contribution to journalMeeting abstract

Overview of the Pharmacological Treatment of Cystic Fibrosis

Gilpin, D., Tunney, M., Downey, D. & Elborn, S., 2013, Hospital Pharmacy Journal.

Research output: Contribution to specialist publicationArticle

10 Citations (Scopus)
2012

121 Molecular comparison of Pseudomonas aeruginosa isolated from patients with CF and non-CF bronchiectasis: Journal of Cystic Fibrosis

Pattison, S., Wei, L., Kenna, D., Drain, M., Tunney, M., Elborn, J. S. & Gilpin, D. F., 2012, In : Journal of Cystic Fibrosis. 11, p. S87

Research output: Contribution to journalMeeting abstract

126 Typing of Prevotella spp. from CF and patients with other diseases: Journal of Cystic Fibrosis

Graham, K., Sherrard, L., Gilpin, D. F., Bull, M., Mahenthiralingam, E., Tunney, M. & Elborn, J. S., 2012, In : Journal of Cystic Fibrosis. 11, p. S88

Research output: Contribution to journalMeeting abstract