Tim Skvortsov

Research output

Research output per year 2010 2018 2019 2024

• 39 Article
• 11 Poster
• 7 Abstract
• 2 Paper
• 6 More
  • 2 Meeting abstract
  • 2 Working paper
  • 1 Chapter
  • 1 Review article

Research output per year

Research output per year

Search results

• 2024

  A novel bioinformatic method for the identification of antimicrobial peptides in metagenomes

  Megaw, J., Skvortsov, T., Gori, G., Dabai, A. I., Gilmore, B. F. & Allen, C. C. R., Mar 2024, In: Journal of Applied Microbiology. 135, 3, 9 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Peptide 100%
  • Antimicrobials 100%
  • Antibiotic 49%
  • Lipid 49%
  • Peptide Sequence 49%
  1 Citation (Scopus)

  10 Downloads (Pure)

• A smart sensor for monitoring antimicrobial interventions in wound infections

  Magee, E., Yusufu, D., Rice, C. J., Skvortsov, T., Mills, A. & Gilmore, B. F., 15 Apr 2024, In: Sensors and Actuators B: Chemical. 405, 135179.

  Research output: Contribution to journal › Article › peer-review

  • Sensor 100%
  • Smart Sensor 100%
  • Smart Sensors 100%
  • Aeruginosa 80%
  • Biofilm 75%

• Enzyme screening and engineering for N- and O-demethylation: key steps in the synthesis of buprenorphine

  Carvalho, A. T. P., Dourado, D. F. A. R., Spratt, J., Caswell, J. M., Skvortsov, T., Quinn, D. J., Carey, J. S. & Moody, T. S., 16 Feb 2024, (Early online date) In: Organic Process Research & Development.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Buprenorphine 100%
  • Thebaine 25%
  • Benzylisoquinoline Alkaloid 14%
  105 Downloads (Pure)

• Identification and characterisation of two functional antibiotic MATE efflux pumps in the archaeon Halorubrum amylolyticum

  Fakhoury, A. A., Thompson, T. P., Rahman, K. M., Megaw, J., McAteer, M. I., Skvortsov, T., Kelly, S. A. & Gilmore, B., 02 Aug 2024, In: npj Antimicrobials and Resistance. 2, 21.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Halorubrum 100%
  • Thioridazine 25%
  • Chlorpromazine 25%
  • Eukaryote 25%
  • Halophilic Archaeon 25%
  11 Downloads (Pure)

• Plasma activated water pre-treatment substantially enhances phage activity against Proteus mirabilis biofilms

  Shambharkar, A., Thompson, T. P., McClenaghan, L. A., Bourke, P., Gilmore, B. F. & Skvortsov, T., 01 Dec 2024, In: Biofilm. 8, 10 p., 100230.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Bacteriophage 100%
  • Proteus mirabilis 100%
  • Cold Plasma 100%
  • Antiinfective Agent 30%
  • Urinary Tract Infection 20%
  8 Downloads (Pure)
• 2023

  Cold atmospheric pressure plasma-antibiotic synergy in Pseudomonas aeruginosa biofilms is mediated via oxidative stress response

  Maybin, J. A., Thompson, T. P., Flynn, P. B., Skvortsov, T., Hickok, N. J., Freeman, T. A. & Gilmore, B. F., Dec 2023, In: Biofilm. 5, 100122.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Blood Plasma 100%
  • Pseudomonas aeruginosa 100%
  • Biofilm 100%
  • Oxidative Stress 100%
  • Atmospheric Pressure 100%
  16 Citations (Scopus)

  76 Downloads (Pure)

• DePolymerase Predictor (DePP): a machine learning tool for the targeted identification of phage depolymerases

  Magill, D. J. & Skvortsov, T. A., 19 May 2023, In: BMC Bioinformatics. 24, 11 p., 208.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Learning 100%
  • Bacteriophage 100%
  • Biofilm 100%
  • Development 66%
  • Lysozyme 66%
  14 Citations (Scopus)

  40 Downloads (Pure)

• Identification and characterisation of two functional antibiotic MATE Efflux pumps in the halophilic archaeon halorubrum saccharovorum CSM52

  Gilmore, B., Fakhoury, A., Thompson, T., Rahman, K., Megaw, J., McAteer, M., Skvortsov, T. & Kelly, S., 20 Nov 2023.

  Research output: Working paper

  File
  12 Downloads (Pure)

• Investigation of hospital discharge cases and SARS-CoV-2 introduction into Lothian care homes

  Cotton, S., McHugh, M. P., Dewar, R., Haas, J. G., Templeton, K., Robson, S. C., Connor, T. R., Loman, N. J., Golubchik, T., Martinez Nunez, R. T., Bonsall, D., Rambaut, A., Jackson, D. K., Hamilton, W. L., Moore, C., Rogan, F., Fairley, D. J., Osman, H., Simpson, D. A. & McKenna, J. P. & 31 others, Temperton, B., Adams, H., Fuchs, M., Miskelly, J., Davis, T., Casey, A., Jones, C. R., Bridgett, S., Goudarzi, S., Jones, S., Taylor, S., Curran, T., Wyatt, T., Skvortsov, T., Bradley, D. T., Moore, J., Lee, J. C., Molnar, Z., Johnson, K., Murray, L. J., Murray, D. R., Baxter, C., Lavin, D., Mariappan, A., Radulescu, C., Singh, A., Tang, M., Williamson, K. A., Scott, C., The COVID-19 Genomics UK (COG-UK) Consortium & Smith, K., May 2023, In: Journal of Hospital Infection. 135, p. 28-36 9 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Hospital 100%
  • Severe Acute Respiratory Syndrome Coronavirus 2 100%
  • Patient 75%
  • Consensus 25%
  • Genome Sequencing 25%
  2 Citations (Scopus)

  85 Downloads (Pure)

• Viruses and other acellular infectious agents: characteristics and control

  Skvortsov, T. & Maillard, J.-Y., 01 Jan 2023, Hugo and Russell's pharmaceutical microbiology. Gilmore , B. F. & Denyer , S. P. (eds.). 9 ed. John Wiley & Sons Ltd, p. 63-97

  Research output: Chapter in Book/Report/Conference proceeding › Chapter
• 2022

  COVID-19 due to the B.1.617.2 (Delta) variant compared to B.1.1.7 (Alpha) variant of SARS-CoV-2: a prospective observational cohort study

  Kläser, K., Molteni, E., Graham, M., Canas, L. S., Österdahl, M. F., Antonelli, M., Chen, L., Deng, J., Murray, B., Kerfoot, E., Wolf, J., May, A., Fox, B., Capdevila, J., Adams, H., Baxter, C., Bradley, D. T., Bridgett, S., Casey, A. & Curran, T. & 30 others, Davis, T., Fairley, D. J., Fuchs, M., Hamilton, W. L., Jackson, D. K., Johnson, K., Jones, S., Jones, C. R., Lavin, D., Lee, J. C. D., Mariappan, A., McKenna, J. P., Molnar, Z., Moore, J., Moore, C., Murray, L. J., Murray, D. R., Osman, H., Radulescu, C., Rogan, F., Scott, C., Simpson, D. A., Singh, A., Skvortsov, T., Tang, M., Taylor, S., Temperton, B., Williamson, K. A., Wyatt, T. & The COVID-19 Genomics U. K. (COG-UK) Consortium, Dec 2022, In: Scientific Reports. 12, 17 p., 10904.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Diseases 100%
  • Infection 100%
  • Severe Acute Respiratory Syndrome Coronavirus 2 100%
  • COVID-19 100%
  • Cohort Study 100%
  41 Citations (Scopus)

  21 Downloads (Pure)

• Mini-XT, a miniaturized tagmentation-based protocol for efficient sequencing of SARS-CoV-2

  Fuchs, M., Radulescu, C., Tang, M., Mahesh, A., Lavin, D., Umbreen, S., McKenna, J., Smyth, M., McColgan, E., Molnar, Z., Baxter, C., Skvortsov, T., Singh, A., Rogan, F., Miskelly, J., Bridgett, S., Fairley, D. & Simpson, D. A., 03 Mar 2022, In: Journal of Translational Medicine. 20, 105.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Sample 100%
  • Sequencing 100%
  • SARS Coronavirus 100%
  • Severe Acute Respiratory Syndrome Coronavirus 2 100%
  • Volume 50%
  7 Citations (Scopus)

  100 Downloads (Pure)

• Recurrent SARS-CoV-2 mutations in immunodeficient patients

  Wilkinson, S. A. J., Sparks, N., Kele, B., Peacock, T. P., Robson, S. C., Connor, T. R., Loman, N. J., Golubchik, T., Martinez Nunez, R. T., Bonsall, D., Rambaut, A., Snell, L. B., Jackson, D. K., Hamilton, W. L., Moore, C., Rogan, F., Fairley, D. J., Osman, H., Simpson, D. A. & McKenna, J. P. & 31 others, Temperton, B., Adams, H., Fuchs, M., Miskelly, J., Davis, T., Casey, A., Jones, C. R., Bridgett, S., Goudarzi, S., Jones, S., Taylor, S., Curran, T., Smith, K., Wyatt, T., Skvortsov, T., Bradley, D. T., Moore, J., Lee, J. C. D., Molnar, Z., Johnson, K., Murray, L. J., Murray, D. R., Baxter, C., Lavin, D., Mariappan, A., Radulescu, C., Singh, A., Tang, M., Williamson, K. A., Scott, C. & The COVID-19 Genomics UK (COG-UK) Consortium, 11 Aug 2022, In: Virus Evolution. 8, 2, 16 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Severe Acute Respiratory Syndrome Coronavirus 2 100%
  • Patient 100%
  • COVID-19 50%
  • Immune Escape 50%
  • Binding Domain 50%
  48 Citations (Scopus)

  24 Downloads (Pure)

• SARS-CoV-2 lineage dynamics in England from September to November 2021: high diversity of Delta sub-lineages and increased transmissibility of AY.4.2

  Eales, O., Page, A. J., de Oliveira Martins, L., Wang, H., Bodinier, B., Haw, D., Jonnerby, J., Atchison, C., Robson, S. C., Connor, T. R., Loman, N. J., Golubchik, T., Jackson, D. K., Hamilton, W. L., Moore, C., Rogan, F., Fairley, D. J., Osman, H., Simpson, D. A. & McKenna, J. P. & 31 others, Temperton, B., Adams, H., Fuchs, M., Miskelly, J., Davis, T., Casey, A., Jones, C. R., Bridgett, S., Goudarzi, S., Jones, S., Taylor, S., Curran, T., Smith, K., Wyatt, T., Skvortsov, T., Bradley, D. T., Moore, J., Lee, J. C. D., Molnar, Z., Johnson, K., Murray, L. J., Murray, D. R., Baxter, C., Lavin, D., Mariappan, A., Radulescu, C., Singh, A., Tang, M., Williamson, K. A., Scott, C. & The COVID-19 Genomics UK (COG-UK) Consortium, Dec 2022, In: BMC Infectious Diseases. 22, 17 p., 647.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Lineages 100%
  • Severe Acute Respiratory Syndrome Coronavirus 2 100%
  • Polymerase Chain Reaction 11%
  • COVID-19 11%
  • Immune Escape 11%
  11 Citations (Scopus)

  14 Downloads (Pure)

• SARS-CoV-2 Omicron is an immune escape variant with an altered cell entry pathway

  Willett, B. J., Grove, J., MacLean, O. A., Wilkie, C., De Lorenzo, G., Furnon, W., Cantoni, D., Scott, S., Logan, N., Ashraf, S., Manali, M., Szemiel, A., Fairley, D. J., McKenna, J. P., Curran, T., Adams, H., Hamilton, W. L., Smith, K., Davis, T. & Moore, J. & 32 others, Lee, J. C. D., Bradley, D. T., Wyatt, T., Osman, H., Moore, C., Taylor, S., Jones, S., Casey, A., Singh, A., Mariappan, A., Baxter, C., Radulescu, C., Simpson, D. A., Lavin, D., Rogan, F., Miskelly, J., Fuchs, M., Tang, M., Bridgett, S., Skvortsov, T., Molnar, Z., Jones, C. R., Goudarzi, S., Johnson, K., Murray, L. J., Murray, D. R., Williamson, K. A., Temperton, B., Scott, C., Jackson, D. K., The COVID-19 Genomics UK (COG-UK) Consortium & PITCH Consortium, 01 Aug 2022, In: Nature Microbiology. 7, 8, p. 1161-1179 19 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Severe Acute Respiratory Syndrome Coronavirus 2 100%
  • Omicron Coronavirus Variant 100%
  • Immune Escape 100%
  • Protein 66%
  • Binding Domain 66%
  354 Citations (Scopus)

  12 Downloads (Pure)

• Spatial growth rate of emerging SARS-CoV-2 lineages in England, September 2020-December 2021

  Smallman-Raynor, M. R., Cliff, A. D., Robson, S. C., Connor, T. R., Loman, N. J., Golubchik, T., Martinez Nunez, R. T., Bonsall, D., Rambaut, A., Snell, L. B., Livett, R., Ludden, C., Corden, S., Jackson, D. K., Hamilton, W. L., Moore, C., Rogan, F., Fairley, D. J., Osman, H. & Simpson, D. A. & 31 others, McKenna, J. P., Temperton, B., Adams, H., Fuchs, M., Miskelly, J., Davis, T., Casey, A., Jones, C. R., Bridgett, S., Goudarzi, S., Jones, S., Taylor, S., Curran, T., Wyatt, T., Skvortsov, T., Bradley, D. T., Moore, J., Lee, J. C. D., Molnar, Z., Johnson, K., Murray, L. J., Murray, D. R., Baxter, C., Lavin, D., Mariappan, A., Radulescu, C., Singh, A., Tang, M., Williamson, K. A., Scott, C. & The COVID-19 Genomics UK (COG-UK) Consortium, 20 Jul 2022, In: Epidemiology and infection. 150, e145.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Severe Acute Respiratory Syndrome Coronavirus 2 100%
  • England 100%
  • SARS Coronavirus 100%
  • Lineages 100%
  • Omicron Coronavirus Variant 66%
  6 Citations (Scopus)

  2 Downloads (Pure)
• 2021

  Genomic reconstruction of the SARS-CoV-2 epidemic in England

  Vöhringer, H. S., Sanderson, T., Sinnott, M., De Maio, N., Nguyen, T., Goater, R., Schwach, F., Jackson, D., Jackson, D., Patel, G., Robinson, D., Scott, C., Smith, J., Wilson, M., Hamilton, W. L., Moore, C., Rogan, F., Fairley, D. J., Osman, H. & Simpson, D. A. & 32 others, McKenna, J. P., Temperton, B., Adams, H., Fuchs, M., Miskelly, J., Davis, T., Casey, A., Jones, C. R., Bridgett, S., Goudarzi, S., Jones, S., Taylor, S., Curran, T., Smith, K., Wyatt, T., Skvortsov, T., Bradley, D. T., Moore, J., Lee, J. C. D., Molnar, Z., Johnson, K., Murray, L. J., Murray, D. R., Baxter, C., Lavin, D., Mariappan, A., Radulescu, C., Singh, A., Tang, M., Williamson, K. A., The Wellcome Sanger Institute COVID-19 Surveillance Team & The COVID-19 Genomics UK (COG-UK) Consortium, 16 Dec 2021, In: Nature. 600, 7889, p. 506-511 6 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Severe Acute Respiratory Syndrome Coronavirus 2 100%
  • Reconstruction 100%
  • Coronavirus 100%
  • Analysis 33%
  • Authority 33%
  57 Citations (Scopus)

  13 Downloads (Pure)

• Microbiology of a NaCl stalactite 'salticle' formed within Triassic halite

  Thompson, T. P., Kelly, S. A., Skvortsov, T., Plunkett, G., Ruffell, A., Hallsworth, J. E., Hopps, J. & Gilmore, B. F., 19 May 2021, (Early online date) In: Environmental Microbiology. 23, 7, p. 3881-3895 15 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Microbiology 100%
  • Soil 100%
  • Halite 100%
  • Fluid Inclusion 100%
  • Stalactite 100%
  10 Citations (Scopus)

  193 Downloads (Pure)

• Novel Phage-Derived Depolymerase with Activity against Proteus mirabilis Biofilms

  Rice, C. J., Kelly, S. A., O’Brien, S. C., Melaugh, E. M., Ganacias, J. C. B., Chai, Z. H., Gilmore, B. F. & Skvortsov, T., 19 Oct 2021, In: Microorganisms. 9, 10, 2172.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Proteus mirabilis 100%
  • Bacteriophage 100%
  • Biofilm 100%
  • Proteus 80%
  • Protein 60%
  17 Citations (Scopus)

  142 Downloads (Pure)

• Phylogenetic systematics of Butyrivibrio and Pseudobutyrivibrio genomes illustrate vast taxonomic diversity, open genomes and an abundance of carbohydrate-active enzyme family isoforms

  Pidcock, S. E., Skvortsov, T., Santos, F. G., Courtney, S. J., Sui-Ting, K., Creevey, C. J. & Huws, S. A., 04 Oct 2021, In: Microbial Genomics. 7, 10, 000638.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Cladistics 100%
  • Butyrivibrio 100%
  • Gene 57%
  • Species 42%
  • Genus 28%
  21 Citations (Scopus)

  119 Downloads (Pure)

• Small RNA F6 Provides Mycobacterium smegmatis Entry into Dormancy

  Grigorov, A., Bychenko, O., Salina, E. G., Skvortsova, Y., Mazurova, A., Skvortsov, T., Kaprelyants, A. & Azhikina, T., 26 Oct 2021, In: International Journal of Molecular Sciences. 22, 21, 11536.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Mycobacterium Smegmatis 100%
  • Dormancy 100%
  • RNA 100%
  • Adaptation 66%
  • Smegma 66%
  5 Citations (Scopus)

  75 Downloads (Pure)
• 2020

  Engineering Peptides to Catalyze and Control Stabilization of Gas Hydrates: Learning from Nature

  Ghaani, M. R., Allen, C. C. R., Skvortsov, T. & English, N. J., 17 Jun 2020, In: Journal of Physical Chemistry Letters. 11, 13, p. 5068–5075 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Stabilization 100%
  • Learning 100%
  • Peptide 100%
  • Gas Hydrate 100%
  • Gas 100%
  12 Citations (Scopus)

• Rapid myobacterium tuberculosis spoligotyping from uncorrected long reads using Galru

  Page, A. J., Alikhan, N.-F., Strinden, M., Le Viet, T. & Skvortsov, T., 2020, In: bioRxiv.

  Research output: Contribution to journal › Article

  File
  4 Downloads (Pure)
• 2019

  Bacteriophages against Proteus mirabilis Biofilms

  Rice, C., Ganacias, C. J., Chai, Z., Flynn, P. B., Gilmore, B. F., Jones, B. V., Irwin, N., Kulakov, L. A. & Skvortsov, T., 20 Sept 2019. 1 p.

  Research output: Contribution to conference › Poster

  File

  • Bacteriophage 100%
  • Biofilm 100%
  • Proteus mirabilis 100%
  • Bacterium 66%
  • Urine 66%
  137 Downloads (Pure)

• Bacteriophages for Biofilm Eradication

  Rice, C., Skvortsov, T., Kumaresan, D., Flynn, P., Gilmore, B. & Kulakov, L., 20 Sept 2019.

  Research output: Contribution to conference › Poster

  File

  • Bacteriophage 100%
  • Biofilm 100%
  • Time 20%
  • Bacterium 20%
  • Species 20%
  130 Downloads (Pure)

• Biodiversity and antibiotic resistance profiling of a Triassic halite deposit in Northern Ireland

  Megaw, J., Kelly, S., Thompson, T., Skvortsov, T. & Gilmore, B., 2019, p. 494-494. 1 p.

  Research output: Contribution to conference › Poster

  • Antimicrobial Resistance 100%
  • Biodiversity 100%
  • Halite 100%
  • Antibiotic Resistance 100%
  • Genus 50%

• Characterisation of a solvent-tolerant haloarchaeal (R)-selective transaminase isolated from a Triassic period salt mine

  Kelly, S., Magill, D., Megaw, J., Skvortsov, T., Allers, T., McGrath, J., Allen, C., Moody, T. S. & Gilmore, B., 23 May 2019, In: Applied Microbiology and Biotechnology. 103, p. 5727

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Dynamics 100%
  • Extremophile 100%
  • Halophilic Archaeon 100%
  • Heat Tolerance 100%
  • Molecular Model 100%
  14 Citations (Scopus)

  274 Downloads (Pure)

• Discovery of Novel Transaminases from Halophilic Microorganisms

  Kelly, S., Magill, D., Megaw, J., Skvortsov, T., McGrath, J., Allen, C. & Gilmore, B., 2019.

  Research output: Contribution to conference › Paper

• Effect of soil horizon stratigraphy on the microbial ecology of alpine paleosols

  Young, J. M., Skvortsov, T., Kelleher, B. P., Mahaney, W. C., Somelar, P. & Allen, C. C. R., 20 Mar 2019, In: Science of the Total Environment. 657, p. 1183-1193

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Paleosol 100%
  • Stratigraphy 100%
  • Microbial Ecology 100%
  • Soil Horizon 100%
  • Variation 66%
  17 Citations (Scopus)

  380 Downloads (Pure)

• Genomic hypervariability of phage Andromeda is unique among known dsDNA viruses

  Magill, D. J., Kulakov, L. A. & Skvortsov, T. A., 25 Apr 2019.

  Research output: Working paper

  Open Access

  File

  • Double-Stranded DNA Virus 100%
  • Bacteriophage 100%
  • Autographivirinae 50%
  • Podoviridae 16%
  • Virus Quasispecies 16%
  14 Downloads (Pure)

• Isolation of Novel Bacteriophages against Cystic Fibrosis-associated Bacteria

  Chai, Z., Rice, C., Ganacias, C. J., O'Brien, S., Sherrard, L., Gilmore, B. & Skvortsov, T., 2019.

  Research output: Contribution to conference › Poster

• Leveraging structural relationships as a novel mode of viral classification

  Magill, D., Skvortsov, T., O’Flaherty, V. & McGrath, J., 08 Apr 2019, In: Access Microbiology. 1, 1A, 1 p.

  Research output: Contribution to journal › Meeting abstract › peer-review

  Open Access

  • Bacteriophage 100%
  • Cladistics 50%
  • Phylogeny 50%
  • Evolution 16%
  • Marker Gene 16%

• Leveraging Structural Relationships as a Novel Mode of Viral Classification

  Magill, D., Skvortsov, T., Vincent, O. & McGrath, J., 2019, p. 42-42. 1 p.

  Research output: Contribution to conference › Poster

  • Classification 100%
  • Bacteriophage 100%
  • Phylogeny 50%
  • Protein 33%
  • Nested Gene 16%

• Microbial Stabilization and Kinetic Enhancement of Marine Methane Hydrates

  Ghaani, M. R., Allen, C. C. R., Young, J. M., Nandi, P. K., Dandare, S. U., Skvortsov, T. & English, N. J., 26 Nov 2019, (Early online date) In: Geomicrobiology Journal.

  Research output: Contribution to journal › Article › peer-review

  • Stabilization 100%
  • Augmentation 100%
  • Methane Hydrate 100%
  • Hydrate 80%
  • Clathrate 40%
  5 Citations (Scopus)

• Profiling the microbial community of a Triassic halite deposit in Northern Ireland: an environment with significant potential for biodiscovery

  Megaw, J., Kelly, S. A., Thompson, T. P., Skvortsov, T. & Gilmore, B. F., 28 Nov 2019, In: FEMS Microbiology Letters. 366, 22, 11 p., fnz242.

  Research output: Contribution to journal › Article › peer-review

  • Environment 100%
  • Microbial Community 100%
  • Deposit 100%
  • Halite 100%
  • Genus 100%
  8 Citations (Scopus)

• Successful elimination of Pseudomonas aeruginosa biofilms with a novel bacteriophage

  Ganacias, C. J., Rice, C., Chai, Z., O'Brien, S., Flynn, P., Kulakov, L., Gilmore, B. & Skvortsov, T., 2019.

  Research output: Contribution to conference › Poster

  • Bacteriophage 100%
  • Pseudomonas aeruginosa 100%
  • Biofilm 100%
  • Infectious Agent 20%
  • Aptitude 20%

• Understanding autotrophic bacterial community structure and function along a naturally occurring iron deposit gradient

  Cunningham, M., Macintosh, K. A., Chiang, Y.-C., Seetaloo, N., Dandare, S., Rice, C., Skvortsov, T., Griffiths, D., McGrath, J. & Kumaresan, D., 08 Apr 2019.

  Research output: Contribution to conference › Poster

  File
  113 Downloads (Pure)

• Understanding the evolution and metabolic capabilities of the Butyrivibrio group

  Pidcock, S., Skvortsov, T., Santos, F., Ting, K. S., Creevey, C. & Huws, S., 08 Apr 2019, In: Access Microbiology. 1, 1A, 1 p.

  Research output: Contribution to journal › Meeting abstract › peer-review

  Open Access

  • Butyrivibrio 100%
  • Cladistics 20%
  • Genome Size 10%
  • Functional Status 10%
  • Phylogenetic Tree 10%

• Understanding the evolution and metabolic capabilities of the Butyrivibrio group

  Pidcock, S., Skvortsov, T., Godoy Santos, F., Siu-Ting, K., Creevey, C. & Huws, S., 2019, p. 270-270. 1 p.

  Research output: Contribution to conference › Poster

  • Comprehension 100%
  • Evolution 100%
  • Butyrivibrio 100%
  • Group 100%
  • Metabolic 100%
• 2018

  Characterization of a novel ω-transaminase from a Triassic salt mine metagenome

  Kelly, S. A., Skvortsov, T., Magill, D., Quinn, D. J., McGrath, J. W., Allen, C. C. R., Moody, T. S. & Gilmore, B. F., 01 Sept 2018, In: Biochemical and Biophysical Research Communications. 503, 4, p. 2936-2942 7 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Biocatalyst 100%
  • Transaminase 100%
  • Metagenome 100%
  • Metagenomics 66%
  • Lysozyme 33%
  9 Citations (Scopus)

  374 Downloads (Pure)

• Discovery of Novel Halophilic and Halotolerant ω-Transaminases from a Triassic Period Salt Mine

  Kelly, S., Magill, D., Megaw, J., Skvortsov, T., McGrath, J., Allen, C., Moody, T. S. & Gilmore, B., 2018.

  Research output: Contribution to conference › Paper

• Draft genome sequence of Rhodococcus sp. strain NCIMB 12038, a naphthalene-degrading bacterium

  Dandare, S. U., Skvortsov, T., Arkhipova, K. & Allen, C. C. R., 04 Jan 2018, In: Genome Announcements. 6, 1, e01420-17.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Bacterium 100%
  • Naphthalene 100%
  • Gene 50%
  • Biotransformation 50%
  342 Downloads (Pure)

• Draft genome sequence of the predatory marine bacterium Halobacteriovorax sp. strain JY17

  Young, J. M., Skvortsov, T., Arkhipova, K. & Allen, C. C. R., 01 Jan 2018, In: Genome Announcements. 6, 1, p. 1-2 e01416-17.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Genus 100%
  • Bacterium 100%
  • RNA Gene 100%
  • Coding 100%
  • Marine Bacterium 100%
  1 Citation (Scopus)

  287 Downloads (Pure)

• Draft genome sequences of Pseudomonas putida UV4 and UV4/95, toluene dioxygenaseexpressing producers of cis-1,2-dihydrodiols

  Skvortsov, T., Hoering, P., Arkhipova, K., Whitehead, R. C., Boyd, D. R. & Allen, C. C. R., 04 Jan 2018, In: Genome Announcements. 6, 1, p. 1-2 e01419-17.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Pseudomonas putida 100%
  • Toluene 100%
  • Aptitude 50%
  • Phenol 50%
  • Alkene 50%
  3 Citations (Scopus)

  211 Downloads (Pure)

• Investigating the evolutionary divergence of the Butyrivibrio group

  Pidcock, S., Skvortsov, T., Godoy Santos, F., Siu Ting, K., Creevey, C. & Huws, S., 2018.

  Research output: Contribution to conference › Poster

• Investigating the metabolic function of the Butyrivibrio group

  Pidcock, S., Godoy Santos, F., Siu Ting, K., Skvortsov, T., Creevey, C. & Huws, S., 2018.

  Research output: Contribution to conference › Poster

• Spatial requirement for phenylacetone monooxygenases for transformation of non-native linear substrates

  Carvalho, A., Dourado, D., Skvortsov, T., Miguel, D. A., Ferguson, L., Quinn, D., Moody, T. & Huang, M., 03 Jan 2018, (Early online date) In: Physical Chemistry Chemical Physics. p. 1-32

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Monooxygenase 100%
  • Phenylacetone 100%
  • Application 66%
  • Group 66%
  • Mutation 66%
  7 Citations (Scopus)

  341 Downloads (Pure)
• 2017

  Catalytic mechanism of Phenylacetone monooxygenases for non-native linear substrates: implications on rational engineering of BVMOs to expand the substrate specificity

  Carvalho, A. T. P., Dourado, D. F. A. R., Skvortsov, T., de Abreu, M., Ferguson, L., Quinn, D. J., Moody, T. S. & Huang, M., 07 Sept 2017, (Early online date) In: Physical Chemistry Chemical Physics. 19, 39, p. 26851-26861 11 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Reaction Mechanism 100%
  • Monooxygenase 100%
  • Substrate Specificity 100%
  • Phenylacetone 100%
  • Application 40%
  14 Citations (Scopus)

  402 Downloads (Pure)

• Metagenome-derived antimicrobial peptides for food preservation

  Skvortsov, T., Megaw, J., Gilmore, B. & Allen, C., 2017.

  Research output: Contribution to conference › Poster

• Mining for ancient sirtuins in alpine paleosols

  Mackle, J., Skvortsov, T., Allen, C. & Hyland, E. M., 2017.

  Research output: Contribution to conference › Abstract