• Room 01.019 - CEM

    United Kingdom

Accepting PhD Students

20042019

Research output per year

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Research Output

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Article
2019

Assessment and site-specific manipulation of DNA (hydroxy-)methylation during mouse corticogenesis

Noack, F., Pataskar, A., Schneider, M., Buchholz, F., Tiwari, V. K. & Calegari, F., Apr 2019, In : Life science alliance. 2, 2, 15 p., e201900331.

Research output: Contribution to journalArticle

Open Access
File
3 Citations (Scopus)
98 Downloads (Pure)

Deciphering the Gene Regulatory Landscape Encoded in DNA Biophysical Features

Pataskar, A., Vanderlinden, W., Emmerig, J., Singh, A., Lipfert, J. & Tiwari, V. K., 22 Nov 2019, In : iScience. 21, p. 638-649 12 p.

Research output: Contribution to journalArticle

Open Access
File
70 Downloads (Pure)

The centrosome protein AKNA regulates neurogenesis via microtubule organization

Camargo Ortega, G., Falk, S., Johansson, P. A., Peyre, E., Broix, L., Sahu, S. K., Hirst, W., Schlichthaerle, T., De Juan Romero, C., Draganova, K., Vinopal, S., Chinnappa, K., Gavranovic, A., Karakaya, T., Steininger, T., Merl-Pham, J., Feederle, R., Shao, W., Shi, S-H., Hauck, S. M. & 10 others, Jungmann, R., Bradke, F., Borrell, V., Geerlof, A., Reber, S., Tiwari, V. K., Huttner, W. B., Wilsch-Bräuninger, M., Nguyen, L. & Götz, M., 07 Mar 2019, In : Nature. 567, 7746, p. 113-117 5 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)
2018

Exploring the complexity of cortical development using single-cell transcriptomics

Jeong, H. & Tiwari, V. K., 02 Feb 2018, In : Frontiers in Neuroscience. 12, 9 p., 31.

Research output: Contribution to journalArticle

Open Access
File
6 Citations (Scopus)
121 Downloads (Pure)

Stage-Specific Transcription Factors Drive Astrogliogenesis by Remodeling Gene Regulatory Landscapes

Tiwari, N., Pataskar, A., Péron, S., Thakurela, S., Sahu, S. K., Figueres-Oñate, M., Marichal, N., López-Mascaraque, L., Tiwari, V. K. & Berninger, B., 04 Oct 2018, In : Cell Stem Cell. 23, 4, p. 557-571.e8 24 p.

Research output: Contribution to journalArticle

Open Access
File
7 Citations (Scopus)
172 Downloads (Pure)
2017

ERK signalling modulates epigenome to drive epithelial to mesenchymal transition

Navandar, M., Garding, A., Sahu, S. K., Pataskar, A., Schick, S. & Tiwari, V. K., 23 Mar 2017, In : Oncotarget. 8, 17, p. 29269-29281

Research output: Contribution to journalArticle

Open Access
File
10 Citations (Scopus)
129 Downloads (Pure)

FBXO32 promotes microenvironment underlying epithelial-mesenchymal transition via CtBP1 during tumour metastasis and brain development

Sahu, S. K., Tiwari, N., Pataskar, A., Zhuang, Y., Borisova, M., Diken, M., Strand, S., Beli, P. & Tiwari, V. K., 01 Dec 2017, In : Nature Communications. 8, 1

Research output: Contribution to journalArticle

Open Access
File
7 Citations (Scopus)
124 Downloads (Pure)

Genetic Labeling of Nuclei-Specific Thalamocortical Neurons Reveals Putative Sensory-Modality Specific Genes

Gezelius, H., Moreno-Juan, V., Mezzera, C., Thakurela, S., Rodríguez-Malmierca, L. M., Pistolic, J., Benes, V., Tiwari, V. K. & López-Bendito, G., 01 Nov 2017, In : Cerebral Cortex. 27, 11, p. 5054-5069

Research output: Contribution to journalArticle

5 Citations (Scopus)
2016

Computational challenges in modeling gene regulatory events

Pataskar, A. & Tiwari, V. K., 19 Oct 2016, In : Transcription. 7, 5, p. 188-195 8 p.

Research output: Contribution to journalArticle

3 Citations (Scopus)

Distinct roles of hand2 in developing and adult autonomic neurons

Stanzel, S., Stubbusch, J., Pataskar, A., Howard, M. J., Deller, T., Ernsberger, U., Tiwari, V. K., Rohrer, H. & Tsarovina, K., 01 Oct 2016, In : Developmental Neurobiology. 76, 10, p. 1111-1124 14 p.

Research output: Contribution to journalArticle

10 Citations (Scopus)

Mapping gene regulatory circuitry of Pax6 during neurogenesis

Thakurela, S., Tiwari, N., Schick, S., Garding, A., Ivanek, R., Berninger, B. & Tiwari, V. K., 09 Feb 2016, In : Cell death discovery. 2, 22 p., 15045.

Research output: Contribution to journalArticle

Open Access
File
13 Citations (Scopus)
137 Downloads (Pure)

TOX3 regulates neural progenitor identity

Sahu, S. K., Fritz, A., Tiwari, N., Kovacs, Z., Pouya, A., Wüllner, V., Bora, P., Schacht, T., Baumgart, J., Peron, S., Berninger, B., Tiwari, V. K. & Methner, A., 01 Jul 2016, In : Biochimica et Biophysica Acta - Gene Regulatory Mechanisms. 1859, 7, p. 833-840 8 p.

Research output: Contribution to journalArticle

5 Citations (Scopus)
2015

Dynamics and function of distal regulatory elements during neurogenesis and neuroplasticity

Thakurela, S., Sahu, S. K., Garding, A. & Tiwari, V. K., 01 Sep 2015, In : Genome Research. 25, 9, p. 1309-1324 16 p.

Research output: Contribution to journalArticle

29 Citations (Scopus)

Dynamics of chromatin accessibility and epigenetic state in response to UV damage

Schick, S., Fournier, D., Thakurela, S., Sahu, S. K., Garding, A. & Tiwari, V. K., 01 Dec 2015, In : Journal of Cell Science. 128, 23, p. 4380-94 15 p.

Research output: Contribution to journalArticle

15 Citations (Scopus)

JNK-dependent gene regulatory circuitry governs mesenchymal fate

Sahu, S. K., Garding, A., Tiwari, N., Thakurela, S., Toedling, J., Gebhard, S., Ortega, F., Schmarowski, N., Berninger, B., Nitsch, R., Schmidt, M. & Tiwari, V. K., 13 Aug 2015, In : The EMBO Journal. 34, 16, p. 2162-2181 20 p.

Research output: Contribution to journalArticle

11 Citations (Scopus)

NeuroD1 reprograms chromatin and transcription factor landscapes to induce the neuronal program.

Pathway, K., Drg, D. R. G., Pataskar, A., Jung, J., Smialowski, P., Noack, F., Calegari, F., Straub, T. & Tiwari, V. K., 2015, In : The EMBO Journal. p. 1-22 22 p.

Research output: Contribution to journalArticle

64 Citations (Scopus)

The repair of oxidized purines in the DNA of human lymphocytes requires an activation involving NF-YA-mediated upregulation of OGG1

von der Lippen, C., Sahu, S., Seifermann, M., Tiwari, V. K. & Epe, B., 01 Jan 2015, In : DNA Repair. 25, p. 1-8 8 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)
2013

Epigenetic Upregulation of lncRNAs at 13q14.3 in Leukemia Is Linked to the In Cis Downregulation of a Gene Cluster That Targets NF-kB

Garding, A., Bhattacharya, N., Claus, R., Ruppel, M., Tschuch, C., Filarsky, K., Idler, I., Zucknick, M., Caudron-Herger, M., Oakes, C., Fleig, V., Keklikoglou, I., Allegra, D., Serra, L., Thakurela, S., Tiwari, V., Weichenhan, D., Benner, A., Radlwimmer, B., Zentgraf, H. & 7 others, Wiemann, S., Rippe, K., Plass, C., Döhner, H., Lichter, P., Stilgenbauer, S. & Mertens, D., Apr 2013, In : PLoS Genetics. 9, 4

Research output: Contribution to journalArticle

93 Citations (Scopus)

Gene regulation and priming by topoisomerase IIα in embryonic stem cells

Thakurela, S., Garding, A., Jung, J., Schübeler, D., Burger, L. & Tiwari, V. K., 2013, In : Nature Communications. 4

Research output: Contribution to journalArticle

34 Citations (Scopus)

Sox4 Is a Master Regulator of Epithelial-Mesenchymal Transition by Controlling Ezh2 Expression and Epigenetic Reprogramming

Tiwari, N., Tiwari, V. K., Waldmeier, L., Balwierz, P. J., Arnold, P., Pachkov, M., Meyer-Schaller, N., Schübeler, D., vanNimwegen, E. & Christofori, G., 10 Jun 2013, In : Cancer Cell. 23, 6, p. 768-783 16 p.

Research output: Contribution to journalArticle

238 Citations (Scopus)
2012

A chromatin-modifying function of JNK during stem cell differentiation

Tiwari, V. K., Stadler, M. B., Wirbelauer, C., Paro, R., Schübeler, D. & Beisel, C., Jan 2012, In : Nature Genetics. 44, 1, p. 94-100 7 p.

Research output: Contribution to journalArticle

87 Citations (Scopus)
2011

Genomic prevalence of heterochromatic H3K9me2 and transcription do not discriminate pluripotent from terminally differentiated cells

Lienert, F., Mohn, F., Tiwari, V. K., Baubec, T., Roloff, T. C., Gaidatzis, D., Stadler, M. B. & Schübeler, D., Jun 2011, In : PLoS Genetics. 7, 6

Research output: Contribution to journalArticle

87 Citations (Scopus)
2010
2009

Breaching the Boundaries that Safeguard against Repression

Tiwari, V. K. & Baylin, S. B., 14 May 2009, In : Molecular Cell. 34, 4, p. 395-397 3 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)
3 Citations (Scopus)

Nonallelic transvection of multiple imprinted loci is organized by the H19 imprinting control region during germline development

Sandhu, K. S., Shi, C., Sjölinder, M., Zhao, Z., Göndör, A., Liu, L., Tiwari, V. K., Guibert, S., Emilsson, L., Imreh, M. P. & Ohlsson, R., 15 Nov 2009, In : Genes and Development. 23, 22, p. 2598-2603 6 p.

Research output: Contribution to journalArticle

76 Citations (Scopus)
2008

A novel 6C assay uncovers Polycomb-mediated higher order chromatin conformations

Tiwari, V. K., Cope, L., McGarvey, K. M., Ohm, J. E. & Baylin, S. B., Jul 2008, In : Genome Research. 18, 7, p. 1171-1179 9 p.

Research output: Contribution to journalArticle

93 Citations (Scopus)

Epigenetic regulation of TTF-I-mediated promoter-terminator interactions of rRNA genes

Németh, A., Guibert, S., Tiwari, V. K., Ohlsson, R. & Längst, G., 23 Apr 2008, In : The EMBO Journal. 27, 8, p. 1255-1265 11 p.

Research output: Contribution to journalArticle

72 Citations (Scopus)

PcG proteins, DNA methylation, and gene repression by chromatin looping.

Tiwari, V. K., McGarvey, K. M., Licchesi, J. D. F., Ohm, J. E., Herman, J. G., Schübeler, D. & Baylin, S. B., 2008, In : PLoS biology. 6, 12, p. 2911-27 17 p.

Research output: Contribution to journalArticle

151 Citations (Scopus)
2006

Circular chromosome conformation capture (4C) uncovers extensive networks of epigenetically regulated intra- and interchromosomal interactions

Zhao, Z., Tavoosidana, G., Sjölinder, M., Göndör, A., Mariano, P., Wang, S., Kanduri, C., Lezcano, M., Sandhu, K. S., Singh, U., Pant, V., Tiwari, V., Kurukuti, S. & Ohlsson, R., 23 Nov 2006, In : Nature Genetics. 38, 11, p. 1341-1347 7 p.

Research output: Contribution to journalArticle

588 Citations (Scopus)
2004

An Antisense RNA Regulates the Bidirectional Silencing Property of the Kcnq1 Imprinting Control Region

Gondor, A., Thomassin, H., Ohlsson, R., Tiwari, V. K., Grange, T., Kanduri, C., Kanduri, M., Pandey, R. R. & Thakur, N., 31 Aug 2004, In : Molecular and Cellular Biology. 24, 18, p. 7855-7862 8 p.

Research output: Contribution to journalArticle

105 Citations (Scopus)