HistoClean: Open-source Software for Histological Image Pre-processing and Augmentation to Improve Development of Robust Convolutional Neural Networks

Kris McCombe; Stephanie G. Craig; Amélie Viratham Pulsawatdi; Javier I. Quezada-Marín; Matthew Hagan; Simon Rajendran; Matthew Humphries; Victoria Bingham; Manuel Salto-Tellez; Richard Gault; Jacqueline A. James

doi:10.1101/2021.06.07.447339

HistoClean: Open-source Software for Histological Image Pre-processing and Augmentation to Improve Development of Robust Convolutional Neural Networks

Kris McCombe, Stephanie G. Craig, Amélie Viratham Pulsawatdi, Javier I. Quezada-Marín, Matthew Hagan, Simon Rajendran, Matthew Humphries, Victoria Bingham, Manuel Salto-Tellez, Richard Gault, Jacqueline A. James^*

^*Corresponding author for this work

Research output: Other contribution

15 Downloads (Pure)

Original language	English
Type	Preprint
Media of output	bioRxiv Online Preprint Server
DOIs	https://doi.org/10.1101/2021.06.07.447339
Publication status	Published - 26 Aug 2021

Access to Document

10.1101/2021.06.07.447339Licence: CC BY-NC-ND

HistoClean: Open-source Software for Histological Image Pre-processing and Augmentation to Improve Development of Robust Convolutional Neural Networks
Copyright 2021 the Authors This preprint is distributed under a Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/), which permits distribution and reproduction for non-commercial purposes, provided the author and source are cited.
Submitted manuscript, 935 KBLicence: CC BY-NC-ND

Cite this

McCombe, K., Craig, S. G., Viratham Pulsawatdi, A., Quezada-Marín, J. I., Hagan, M., Rajendran, S., Humphries, M., Bingham, V., Salto-Tellez, M., Gault, R., & James, J. A. (2021, Aug 26). HistoClean: Open-source Software for Histological Image Pre-processing and Augmentation to Improve Development of Robust Convolutional Neural Networks. https://doi.org/10.1101/2021.06.07.447339

McCombe, Kris ; Craig, Stephanie G. ; Viratham Pulsawatdi, Amélie ; Quezada-Marín, Javier I. ; Hagan, Matthew ; Rajendran, Simon ; Humphries, Matthew ; Bingham, Victoria ; Salto-Tellez, Manuel ; Gault, Richard ; James, Jacqueline A. / HistoClean: Open-source Software for Histological Image Pre-processing and Augmentation to Improve Development of Robust Convolutional Neural Networks. 2021.

@misc{0d525f6d38614b80b7a22114457dc4d1,

title = "HistoClean: Open-source Software for Histological Image Pre-processing and Augmentation to Improve Development of Robust Convolutional Neural Networks",

author = "Kris McCombe and Craig, {Stephanie G.} and {Viratham Pulsawatdi}, Am{\'e}lie and Quezada-Mar{\'i}n, {Javier I.} and Matthew Hagan and Simon Rajendran and Matthew Humphries and Victoria Bingham and Manuel Salto-Tellez and Richard Gault and James, {Jacqueline A.}",

year = "2021",

month = aug,

day = "26",

doi = "10.1101/2021.06.07.447339",

language = "English",

type = "Other",

}

HistoClean: Open-source Software for Histological Image Pre-processing and Augmentation to Improve Development of Robust Convolutional Neural Networks. / McCombe, Kris ; Craig, Stephanie G.; Viratham Pulsawatdi, Amélie; Quezada-Marín, Javier I.; Hagan, Matthew; Rajendran, Simon; Humphries, Matthew; Bingham, Victoria ; Salto-Tellez, Manuel ; Gault, Richard ; James, Jacqueline A.

2021, Preprint.

Research output: Other contribution

TY - GEN

T1 - HistoClean: Open-source Software for Histological Image Pre-processing and Augmentation to Improve Development of Robust Convolutional Neural Networks

AU - McCombe, Kris

AU - Craig, Stephanie G.

AU - Viratham Pulsawatdi, Amélie

AU - Quezada-Marín, Javier I.

AU - Hagan, Matthew

AU - Rajendran, Simon

AU - Humphries, Matthew

AU - Bingham, Victoria

AU - Salto-Tellez, Manuel

AU - Gault, Richard

AU - James, Jacqueline A.

PY - 2021/8/26

Y1 - 2021/8/26

U2 - 10.1101/2021.06.07.447339

DO - 10.1101/2021.06.07.447339

M3 - Other contribution

ER -