The Role of High Performance, Grid and Cloud Computing in High-Throughput Sequencing

Gaye Lightbody, Fiona Browne, Huiru Zheng, Valeriia Haberland, Jaine Blayney

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Citation (Scopus)
319 Downloads (Pure)

Abstract

We have reached the era of full genome sequencing using high throughput sequencing technologies pouring out gigabases of reads in a day. To fully benefit from such a profusion of data high performance tools and systems are needed to extract the information lying within the sequences. This paper provides an overview of the evolution of high-throughput sequencing and the tools, infrastructure and data management developing in this space to support a key area in personalized medicine. The paper concludes by providing an outlook in the future of such technologies and their applications and how they might shape clinical governance. 
Original languageEnglish
Title of host publication2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM): Proceedings
Number of pages6
ISBN (Electronic)978-1-5090-1611-2
DOIs
Publication statusPublished - 19 Jan 2017
EventIEEE International Conference on Bioinformatics and Biomedicine (BIBM) - https://cci.drexel.edu/ieeebibm/bibm2016/, Shenzhen, China
Duration: 15 Dec 201618 Dec 2016

Conference

ConferenceIEEE International Conference on Bioinformatics and Biomedicine (BIBM)
Abbreviated titleBIBM
CountryChina
CityShenzhen
Period15/12/201618/12/2016

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Grid computing
Cloud computing
Throughput
Information management
Medicine
Genes

Cite this

Lightbody, G., Browne, F., Zheng, H., Haberland, V., & Blayney, J. (2017). The Role of High Performance, Grid and Cloud Computing in High-Throughput Sequencing. In 2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM): Proceedings https://doi.org/10.1109/BIBM.2016.7822643
Lightbody, Gaye ; Browne, Fiona ; Zheng, Huiru ; Haberland, Valeriia ; Blayney, Jaine. / The Role of High Performance, Grid and Cloud Computing in High-Throughput Sequencing. 2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM): Proceedings. 2017.
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Lightbody, G, Browne, F, Zheng, H, Haberland, V & Blayney, J 2017, The Role of High Performance, Grid and Cloud Computing in High-Throughput Sequencing. in 2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM): Proceedings. IEEE International Conference on Bioinformatics and Biomedicine (BIBM), Shenzhen, China, 15/12/2016. https://doi.org/10.1109/BIBM.2016.7822643

The Role of High Performance, Grid and Cloud Computing in High-Throughput Sequencing. / Lightbody, Gaye; Browne, Fiona; Zheng, Huiru; Haberland, Valeriia; Blayney, Jaine.

2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM): Proceedings. 2017.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

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Lightbody G, Browne F, Zheng H, Haberland V, Blayney J. The Role of High Performance, Grid and Cloud Computing in High-Throughput Sequencing. In 2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM): Proceedings. 2017 https://doi.org/10.1109/BIBM.2016.7822643