Twenty-two novel microsatellite loci for lumpfish (Cyclopterus lumpus)

Sigurlaug Skirnisdottir*, Gudbjorg Olafsdottir, Kristinn Olafsson, Thomas Jendrossek, Hywel ap Dafydd Lloyd, Sarah Helyar, Christophe Pampoulie, Anna K. Danielsdottir, Jacob M. Kasper

*Corresponding author for this work

Research output: Contribution to journalArticle

7 Citations (Scopus)

Abstract

Lumpfish (Cyclopterus lumpus L. 1758) are widely distributed on both sides of the North Atlantic. They are a commercially important species, but stock size estimates have declined since the mid-1980s in Canada, Norway and Iceland. Little is known about the biology of this species, in particular the breeding migrations and population structure which are fundamental for effective management. This paper describes the development and characterization of twenty-two polymorphic microsatellite loci using next generation sequencing. The number of alleles per locus ranged from 3 to 27 in two geographically distant North Atlantic populations, with observed and expected heterozygosities ranging between 0. 0625-0. 979 and 0. 0618-0. 946, respectively. These loci are an important resource that will allow assessment of the population genetic structure of this species, and contribute to its appropriate management.

Original languageEnglish
Pages (from-to)177-179
Number of pages3
JournalConservation Genetics Resources
Volume5
Issue number1
Early online date23 Sep 2012
DOIs
Publication statusPublished - 2013

Keywords

  • Genotyping
  • Lumpfish
  • Microsatellite
  • Next generation sequencing

ASJC Scopus subject areas

  • Genetics
  • Ecology, Evolution, Behavior and Systematics

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    Skirnisdottir, S., Olafsdottir, G., Olafsson, K., Jendrossek, T., Lloyd, H. A. D., Helyar, S., Pampoulie, C., Danielsdottir, A. K., & Kasper, J. M. (2013). Twenty-two novel microsatellite loci for lumpfish (Cyclopterus lumpus). Conservation Genetics Resources, 5(1), 177-179. https://doi.org/10.1007/s12686-012-9762-y