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    Scopus Citations 98

    1. 2018
    2. Published

      Phosphorylation of synaptic GTPase-activating protein (synGAP) by polo-like kinase (Plk2) alters the ratio of its GAP activity toward HRas, Rap1 and Rap2 GTPases.

      Walkup IV, W. G., Sweredoski, M. J., Graham, R., Hess, S. & Kennedy, M. B., 10 Sep 2018, In : Biochemical and Biophysical Research Communications. 503, 3, p. 1599-1604

      Research output: Contribution to journalArticle

    3. 2017
    4. Published

      A combined biomarker panel shows improved sensitivity for the early detection of ovarian cancer allowing the identification of the most aggressive type II tumours

      Russell, M. R., Graham, C., D'Amato, A., Gentry-Maharaj, A., Ryan, A., Kalsi, J. K., Ainley, C., Whetton, A. D., Menon, U., Jacobs, I. & Graham, R. L. J., 22 Aug 2017, In : British Journal of Cancer. 117, 5, p. 666-674 9 p.

      Research output: Contribution to journalArticle

    5. 2016
    6. Published

      Novel risk models for early detection and screening of ovarian cancer

      Russell, M. R., D'Amato, A., Graham, C., Crosbie, E. J., Gentry-Maharaj, A., Ryan, A., Kalsi, J. K., Fourkala, E. O., Dive, C., Walker, M., Whetton, A. D., Menon, U., Jacobs, I. & Graham, R. L. J., 26 Nov 2016, In : Oncotarget. 8, 1, p. 785-797

      Research output: Contribution to journalArticle

    7. Protein Z: A putative novel biomarker for early detection of ovarian cancer

      Russell, M. R., Walker, M. J., Williamson, A. J. K., Gentry-Maharaj, A., Ryan, A., Kalsi, J., Skates, S., D'Amato, A., Dive, C., Pernemalm, M., Humphryes, P. C., Fourkala, E-O., Whetton, A. D., Menon, U., Jacobs, I. & Graham, R. L. J., 15 Jun 2016, In : International Journal of Cancer. 138, 12, p. 2984-92

      Research output: Contribution to journalArticle

    8. 2015
    9. Cell-specific proteomic analysis in Caenorhabditis elegans

      Yuet, K. P., Doma, M. K., Ngo, J. T., Sweredoski, M. J., Graham, R. L. J., Moradian, A., Hess, S., Schuman, E. M., Sternberg, P. W. & Tirrell, D. A., 03 Mar 2015, In : Proceedings of the National Academy of Sciences of the United States of America. 112, 9, p. 2705-10 6 p.

      Research output: Contribution to journalArticle

    10. Phosphorylation of synaptic GTPase-activating protein (synGAP) by Ca2+/calmodulin-dependent protein kinase II (CaMKII) and cyclin-dependent kinase 5 (CDK5) alters the ratio of its GAP activity toward Ras and Rap GTPases

      Walkup, W. G., Washburn, L., Sweredoski, M. J., Carlisle, H. J., Graham, R. L., Hess, S. & Kennedy, M. B., 20 Feb 2015, In : The Journal of biological chemistry. 290, 8, p. 4908-27 20 p.

      Research output: Contribution to journalArticle

    11. 2014
    12. Published

      F-box Protein FBXL16 Binds PP2A-B55α and Regulates Differentiation of Embryonic Stem Cells along the FLK1+ Lineage

      Honarpour, N., Rose, C. M., Brumbaugh, J., Anderson, J., Graham, R. L. J., Sweredoski, M. J., Hess, S., Coon, J. J. & Deshaies, R. J., 01 Mar 2014, In : Molecular & cellular proteomics : MCP. 13, 3, p. 780-791 12 p.

      Research output: Contribution to journalArticle

    13. Published

      Comprehensive proteomic profiling of outer membrane vesicles from Campylobacter jejuni

      Jang, K-S., Sweredoski, M. J., Graham, R. L. J., Hess, S. & Clemons, W. M., 26 Feb 2014, In : Journal of proteomics. 98, p. 90-8

      Research output: Contribution to journalArticle

    14. Published

      Semiquantitative analysis of clinical heat stress in Clostridium difficile strain 630 using a GeLC/MS workflow with emPAI quantitatio

      Ternan, N. G., Jain, S., Graham, R. L. J. & McMullan, G., 24 Feb 2014, In : PLoS ONE. 9, 2, e88960., e88960

      Research output: Contribution to journalArticle

    15. Published

      Identification of secreted bacterial proteins by noncanonical amino acid tagging

      Mahdavi, A., Szychowski, J., Ngo, J. T., Sweredoski, M. J., Graham, R. L. J., Hess, S., Schneewind, O., Mazmanian, S. K. & Tirrell, D. A., 07 Jan 2014, In : Proceedings of the National Academy of Sciences of the United States of America. 111, 1, p. 433-438

      Research output: Contribution to journalArticle

    16. 2013
    17. Published

      Perturbations to the ubiquitin conjugate proteome in yeast δubx mutants identify Ubx2 as a regulator of membrane lipid composition

      Kolawa, N., Sweredoski, M. J., Graham, R. L. J., Oania, R., Hess, S. & Deshaies, R. J., Oct 2013, In : Molecular & cellular proteomics : MCP. 12, 10, p. 2791-803 13 p.

      Research output: Contribution to journalArticle

    18. Published

      Structural basis for high-affinity binding of LEDGF PWWP to mononucleosomes

      Eidahl, J. O., Crowe, B. L., North, J. A., McKee, C. J., Shkriabai, N., Feng, L., Plumb, M., Graham, R. L., Gorelick, R. J., Hess, S., Poirier, M. G., Foster, M. P. & Kvaratskhelia, M., 01 Apr 2013, In : Nucleic Acids Research. 41, 6, p. 3924-36 13 p.

      Research output: Contribution to journalArticle

    19. Published

      Cand1 promotes assembly of new SCF complexes through dynamic exchange of F box proteins

      Pierce, N. W., Lee, J. E., Liu, X., Sweredoski, M. J., Graham, R. L. J., Larimore, E. A., Rome, M., Zheng, N., Clurman, B. E., Hess, S., Shan, S. & Deshaies, R. J., 28 Mar 2013, In : Cell. 153, 1, p. 206-15 10 p.

      Research output: Contribution to journalArticle

    20. Published

      Comprehensive profiling of N-linked glycosylation sites in HeLa cells using hydrazide enrichment

      Malerod, H., Graham, R. L. J., Sweredoski, M. J. & Hess, S., 04 Jan 2013, In : Journal of Proteome Research. 12, 1, p. 248-59 12 p.

      Research output: Contribution to journalArticle

    21. 2012
    22. Avoiding pitfalls in proteomics sample preparation

      Graham, R. L. J., Kalli, A., Smith, G. T., Sweredoski, M. J. & Hess, S., 01 Nov 2012, Biomacromolecular Mass Spectrometry: Tips from the Bench. Nova Science Publishers, Inc, p. 19-34 16 p.

      Research output: Chapter in Book/Report/Conference proceedingChapter

    23. Published

      Protein interaction profiling of the p97 adaptor UBXD1 points to a role for the complex in modulating ERGIC-53 trafficking

      Haines, D. S., Lee, J. E., Beauparlant, S. L., Kyle, D. B., den Besten, W., Sweredoski, M. J., Graham, R. L. J., Hess, S. & Deshaies, R. J., Jun 2012, In : Molecular & cellular proteomics : MCP. 11, 6, p. M111.016444

      Research output: Contribution to journalArticle

    24. Published

      Designer reagents for mass spectrometry-based proteomics: clickable cross-linkers for elucidation of protein structures and interactions

      Sohn, C. H., Agnew, H. D., Lee, J. E., Sweredoski, M. J., Graham, R. L. J., Smith, G. T., Hess, S., Czerwieniec, G., Loo, J. A., Heath, J. R., Deshaies, R. J. & Beauchamp, J. L., 20 Mar 2012, In : Analytical Chemistry. 84, 6, p. 2662-9 8 p.

      Research output: Contribution to journalArticle

    25. Published

      Click chemistry facilitates formation of reporter ions and simplified synthesis of amine-reactive multiplexed isobaric tags for protein quantification

      Sohn, C. H., Lee, J. E., Sweredoski, M. J., Graham, R. L. J., Smith, G. T., Hess, S., Czerwieniec, G., Loo, J. A., Deshaies, R. J. & Beauchamp, J. L., 08 Feb 2012, In : Journal of the American Chemical Society. 134, 5, p. 2672-80 9 p.

      Research output: Contribution to journalArticle

    26. Published

      Novel proteomic tools reveal essential roles of SRP and importance of proper membrane protein biogenesis

      Zhang, D., Sweredoski, M. J., Graham, R. L. J., Hess, S. & Shan, S., Feb 2012, In : Molecular & cellular proteomics : MCP. 11, 2, p. M111.011585

      Research output: Contribution to journalArticle

    27. 2011
    28. Published

      LogViewer: a software tool to visualize quality control parameters to optimize proteomics experiments using Orbitrap and LTQ-FT mass spectrometers

      Sweredoski, M. J., Smith, G. T., Kalli, A., Graham, R. L. J. & Hess, S., Dec 2011, In : Journal of biomolecular techniques : JBT. 22, 4, p. 122-6 5 p.

      Research output: Contribution to journalArticle

    29. Published

      Quantitative proteomic analysis of the heat stress response in Clostridium difficile strain 630

      Jain, S., Graham, C., Graham, R. L. J., McMullan, G. & Ternan, N. G., 02 Sep 2011, In : Journal of Proteome Research. 10, 9, p. 3880-3890 11 p.

      Research output: Contribution to journalArticle

    30. Published

      Broad activation of the ubiquitin-proteasome system by Parkin is critical for mitophagy

      Chan, N. C., Salazar, A. M., Pham, A. H., Sweredoski, M. J., Kolawa, N. J., Graham, R. L. J., Hess, S. & Chan, D. C., 01 May 2011, In : Human Molecular Genetics. 20, 9, p. 1726-37 12 p.

      Research output: Contribution to journalArticle

    31. Published

      The steady-state repertoire of human SCF ubiquitin ligase complexes does not require ongoing Nedd8 conjugation

      Lee, J. E., Sweredoski, M. J., Graham, R. L. J., Kolawa, N. J., Smith, G. T., Hess, S. & Deshaies, R. J., May 2011, In : Molecular & cellular proteomics : MCP. 10, 5, p. M110.006460

      Research output: Contribution to journalArticle

    32. Stable isotope labeling by amino acids in cell culture (SILAC) - an introduction for biologists

      Graham, R. L. J., Sweredoski, M. J. & Hess, S., 23 Mar 2011, In : Current Proteomics. 8, 1, p. 2-16 15 p.

      Research output: Contribution to journalArticle

    33. Published

      Proteomics in the microbial sciences

      Graham, C., McMullan, G. & Graham, R. L. J., 01 Jan 2011, In : Bioengineered Bugs. 2, 1, p. 1-14 14 p.

      Research output: Contribution to journalReview article

    34. 2010
    35. Published

      Proteomic analysis of the insoluble subproteome of Clostridium difficile strain 630

      Jain, S., Graham, R. L. J., McMullan, G. & Ternan, N. G., Nov 2010, In : FEMS Microbiology Letters. 312, 2, p. 151-159 9 p.

      Research output: Contribution to journalLetter

    36. Published

      Identification of host proteins associated with HIV-1 preintegration complexes isolated from infected CD4+ cells

      Raghavendra, N. K., Shkriabai, N., Graham, R. L., Hess, S., Kvaratskhelia, M. & Wu, L., 11 Aug 2010, In : Retrovirology. 7, p. 66

      Research output: Contribution to journalArticle

    37. Mass spectrometry in the elucidation of the glycoproteome of bacterial pathogens

      Graham, R. L. J. & Hess, S., 24 Jun 2010, In : Current Proteomics. 7, 1, p. 57-81 25 p.

      Research output: Contribution to journalArticle

    38. Published

      Comparative genomics and proteomics of Helicobacter mustelae, an ulcerogenic and carcinogenic gastric pathogen

      O'Toole, P. W., Snelling, W. J., Canchaya, C., Forde, B. M., Hardie, K. R., Josenhans, C., Graham, R. L. J., McMullan, G., Parkhill, J., Belda, E. & Bentley, S. D., 10 Mar 2010, In : BMC Genomics. 11, 1, 164., 164

      Research output: Contribution to journalArticle

    39. 2008
    40. Published
    41. 2007
    42. Published

      A semi-quantitative GeLC-MS analysis of temporal proteome expression in the emerging nosocomial pathogen Ochrobactrum anthropi

      Graham, R. L. J., Sharma, M. K., Ternan, N. G., Weatherly, D. B., Tarleton, R. L. & McMullan, G., 13 Jun 2007, In : Genome Biology. 8, 6, R110., R110

      Research output: Contribution to journalArticle

    43. Published

      Multidimensional analysis of the insoluble sub-proteome of Oceanobacillus iheyensis HTE831, an alkaliphilic and halotolerant deep-sea bacterium isolated from the Iheya ridge

      Graham, R. L. J., Pollock, C. E., O'Loughlin, S. N., Ternan, N. G., Weatherly, D. B., Tarleton, R. L. & McMullan, G., Jan 2007, In : Proteomics. 7, 1, p. 82-91 10 p.

      Research output: Contribution to journalArticle

    44. 2006
    45. Published

      Multidimensional proteomic analysis of the soluble subproteome of the emerging nosocomial pathogen Ochrobactrum anthropi

      Graham, R. L. J., Pollock, C. E., O'Loughlin, S. N., Ternan, N. G., Weatherly, D. B., Jackson, P. J., Tarleton, R. L. & McMullan, G., Nov 2006, In : Journal of Proteome Research. 5, 11, p. 3145-3153 9 p.

      Research output: Contribution to journalArticle

    46. Published

      A combined shotgun and multidimensional proteomic analysis of the insoluble subproteome of the obligate thermophile, Geobacillus thermoleovorans T80

      Graham, R. L. J., O'Loughlin, S. N., Pollock, C. E., Ternan, N. G., Weatherly, D. B., Jackson, P. J., Tarleton, R. L. & McMullan, G., Sep 2006, In : Journal of Proteome Research. 5, 9, p. 2465-2473 9 p.

      Research output: Contribution to journalArticle

    47. Published

      A role for carbon catabolite repression in the metabolism of phosphonoacetate by Agromyces fucosus Vs2

      O'Loughlin, S. N., Graham, R. L. J., McMullan, G. & Ternan, N. G., Aug 2006, In : FEMS Microbiology Letters. 261, 1, p. 133-140 8 p.

      Research output: Contribution to journalArticle

    48. Published
    49. 2005
    50. Published